Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB18PQ96TA0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHB18PQ96TA0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHB18PQ96TA0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
PCDHB18PQ96TA0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 AC099791.2-201ENST00000605725 427 ntBASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
PCDHB18PQ96TA0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB18PQ96TA0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 AC241377.3-202ENST00000626088 1088 ntBASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 AC241585.3-202ENST00000628937 1088 ntBASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 AC245100.8-202ENST00000629247 1058 ntBASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB18PQ96TA0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB18PQ96TA0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 pRNA.6-201ENST00000610482 90 ntBASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 pRNA.5-201ENST00000612139 90 ntBASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 pRNA.11-201ENST00000618423 90 ntBASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 pRNA.13-201ENST00000619112 90 ntBASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 AC137767.1-201ENST00000602918 1920 ntBASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHB18PQ96TA0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PCDHB18PQ96TA0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHB18PQ96TA0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
PCDHB18PQ96TA0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB18PQ96TA0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDHB18PQ96TA0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB18PQ96TA0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms