Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GAFA1Q96PS6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.3■□□□□ 0.52
GAFA1Q96PS6 AL031602.1-201ENST00000633169 911 ntBASIC18.3■□□□□ 0.52
GAFA1Q96PS6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GAFA1Q96PS6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 EDA-201ENST00000338901 1233 ntBASIC18.29■□□□□ 0.52
GAFA1Q96PS6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 BX842568.3-201ENST00000418104 571 ntBASIC18.29■□□□□ 0.52
GAFA1Q96PS6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GAFA1Q96PS6 AC087742.1-201ENST00000575880 1738 ntBASIC18.29■□□□□ 0.52
GAFA1Q96PS6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 AC133561.1-201ENST00000568600 2415 ntBASIC18.28■□□□□ 0.52
GAFA1Q96PS6 AC012676.1-201ENST00000574705 1949 ntBASIC18.28■□□□□ 0.52
GAFA1Q96PS6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GAFA1Q96PS6 ESRRAP2-201ENST00000418437 1549 ntBASIC18.28■□□□□ 0.52
GAFA1Q96PS6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AP001330.3-201ENST00000520123 633 ntBASIC18.27■□□□□ 0.52
GAFA1Q96PS6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AC133561.4-201ENST00000566112 224 ntBASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AC233992.3-201ENST00000607491 485 ntBASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AL031432.3-201ENST00000607698 485 ntBASIC18.27■□□□□ 0.52
GAFA1Q96PS6 AL355001.2-201ENST00000620617 1191 ntBASIC18.27■□□□□ 0.52
GAFA1Q96PS6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GAFA1Q96PS6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.27■□□□□ 0.51
GAFA1Q96PS6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GAFA1Q96PS6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 AC008764.7-201ENST00000593779 1081 ntBASIC18.26■□□□□ 0.51
GAFA1Q96PS6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms