Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS33AQ96AX1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 KRT8P33-201ENST00000508125 1423 ntBASIC21.06■□□□□ 0.96
VPS33AQ96AX1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS33AQ96AX1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 AC103724.3-201ENST00000564481 992 ntBASIC21.05■□□□□ 0.96
VPS33AQ96AX1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VPS33AQ96AX1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 LINC01529-204ENST00000636474 1715 ntBASIC21.04■□□□□ 0.96
VPS33AQ96AX1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 AL033527.3-201ENST00000566366 1196 ntBASIC21.04■□□□□ 0.96
VPS33AQ96AX1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VPS33AQ96AX1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VPS33AQ96AX1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 AC012354.3-201ENST00000623734 483 ntBASIC21.02■□□□□ 0.96
VPS33AQ96AX1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS33AQ96AX1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS33AQ96AX1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VPS33AQ96AX1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS33AQ96AX1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS33AQ96AX1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS33AQ96AX1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
VPS33AQ96AX1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VPS33AQ96AX1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VPS33AQ96AX1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21■□□□□ 0.95
VPS33AQ96AX1 AC137630.3-201ENST00000607245 391 ntBASIC21■□□□□ 0.95
VPS33AQ96AX1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21■□□□□ 0.95
VPS33AQ96AX1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VPS33AQ96AX1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VPS33AQ96AX1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VPS33AQ96AX1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS33AQ96AX1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21■□□□□ 0.95
VPS33AQ96AX1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms