Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.36■□□□□ 0.69
AP3S1Q92572 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S1Q92572 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S1Q92572 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S1Q92572 AL592295.1-201ENST00000400984 884 ntBASIC19.35■□□□□ 0.69
AP3S1Q92572 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
AP3S1Q92572 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3S1Q92572 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S1Q92572 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S1Q92572 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S1Q92572 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3S1Q92572 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
AP3S1Q92572 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3S1Q92572 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S1Q92572 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3S1Q92572 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.34■□□□□ 0.69
AP3S1Q92572 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3S1Q92572 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
AP3S1Q92572 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S1Q92572 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3S1Q92572 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
AP3S1Q92572 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
AP3S1Q92572 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S1Q92572 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3S1Q92572 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3S1Q92572 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.33■□□□□ 0.69
AP3S1Q92572 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.33■□□□□ 0.69
AP3S1Q92572 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.33■□□□□ 0.69
AP3S1Q92572 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3S1Q92572 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.33■□□□□ 0.69
AP3S1Q92572 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S1Q92572 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S1Q92572 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.33■□□□□ 0.68
AP3S1Q92572 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
AP3S1Q92572 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S1Q92572 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S1Q92572 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S1Q92572 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3S1Q92572 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.32■□□□□ 0.68
AP3S1Q92572 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 AC026202.3-201ENST00000600805 1127 ntBASIC19.32■□□□□ 0.68
AP3S1Q92572 RAP2CP1-202ENST00000605179 643 ntBASIC19.32■□□□□ 0.68
AP3S1Q92572 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
AP3S1Q92572 AC244015.2-201ENST00000616358 1861 ntBASIC19.32■□□□□ 0.68
AP3S1Q92572 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.32■□□□□ 0.68
AP3S1Q92572 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
AP3S1Q92572 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S1Q92572 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 AC131274.2-201ENST00000580697 1507 ntBASIC19.31■□□□□ 0.68
AP3S1Q92572 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S1Q92572 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
AP3S1Q92572 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.3■□□□□ 0.68
AP3S1Q92572 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
AP3S1Q92572 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.3■□□□□ 0.68
AP3S1Q92572 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
AP3S1Q92572 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.3■□□□□ 0.68
AP3S1Q92572 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S1Q92572 LINC01521-201ENST00000504184 1943 ntBASIC19.29■□□□□ 0.68
AP3S1Q92572 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S1Q92572 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
AP3S1Q92572 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S1Q92572 AC007029.1-201ENST00000604183 313 ntBASIC19.29■□□□□ 0.68
AP3S1Q92572 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S1Q92572 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3S1Q92572 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3S1Q92572 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S1Q92572 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3S1Q92572 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
AP3S1Q92572 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3S1Q92572 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
AP3S1Q92572 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3S1Q92572 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP3S1Q92572 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms