Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.64■■□□□ 1.06
RDH11Q8TC12 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RDH11Q8TC12 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.64■■□□□ 1.06
RDH11Q8TC12 AC021242.3-201ENST00000607598 1377 ntBASIC21.64■■□□□ 1.06
RDH11Q8TC12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RDH11Q8TC12 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RDH11Q8TC12 AL031848.2-201ENST00000607670 837 ntBASIC21.64■■□□□ 1.05
RDH11Q8TC12 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.64■■□□□ 1.05
RDH11Q8TC12 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RDH11Q8TC12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RDH11Q8TC12 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.64■■□□□ 1.05
RDH11Q8TC12 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.64■■□□□ 1.05
RDH11Q8TC12 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.64■■□□□ 1.05
RDH11Q8TC12 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RDH11Q8TC12 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.64■■□□□ 1.05
RDH11Q8TC12 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RDH11Q8TC12 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RDH11Q8TC12 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.63■■□□□ 1.05
RDH11Q8TC12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RDH11Q8TC12 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.63■■□□□ 1.05
RDH11Q8TC12 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RDH11Q8TC12 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.63■■□□□ 1.05
RDH11Q8TC12 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.63■■□□□ 1.05
RDH11Q8TC12 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.63■■□□□ 1.05
RDH11Q8TC12 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RDH11Q8TC12 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RDH11Q8TC12 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RDH11Q8TC12 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RDH11Q8TC12 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RDH11Q8TC12 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RDH11Q8TC12 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RDH11Q8TC12 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RDH11Q8TC12 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RDH11Q8TC12 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RDH11Q8TC12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RDH11Q8TC12 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RDH11Q8TC12 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.61■■□□□ 1.05
RDH11Q8TC12 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.61■■□□□ 1.05
RDH11Q8TC12 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.61■■□□□ 1.05
RDH11Q8TC12 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.6■■□□□ 1.05
RDH11Q8TC12 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.6■■□□□ 1.05
RDH11Q8TC12 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RDH11Q8TC12 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RDH11Q8TC12 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RDH11Q8TC12 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.6■■□□□ 1.05
RDH11Q8TC12 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.59■■□□□ 1.05
RDH11Q8TC12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.59■■□□□ 1.05
RDH11Q8TC12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RDH11Q8TC12 CA15P2-201ENST00000611168 834 ntBASIC21.59■■□□□ 1.05
RDH11Q8TC12 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RDH11Q8TC12 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.59■■□□□ 1.05
RDH11Q8TC12 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RDH11Q8TC12 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RDH11Q8TC12 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RDH11Q8TC12 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.58■■□□□ 1.05
RDH11Q8TC12 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.58■■□□□ 1.05
RDH11Q8TC12 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.58■■□□□ 1.05
RDH11Q8TC12 BX664725.1-201ENST00000438252 379 ntBASIC21.58■■□□□ 1.05
RDH11Q8TC12 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RDH11Q8TC12 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.58■■□□□ 1.04
RDH11Q8TC12 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RDH11Q8TC12 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.58■■□□□ 1.04
RDH11Q8TC12 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.58■■□□□ 1.04
RDH11Q8TC12 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.57■■□□□ 1.04
RDH11Q8TC12 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.57■■□□□ 1.04
RDH11Q8TC12 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RDH11Q8TC12 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.57■■□□□ 1.04
RDH11Q8TC12 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RDH11Q8TC12 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RDH11Q8TC12 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RDH11Q8TC12 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RDH11Q8TC12 AC010542.4-201ENST00000563151 1910 ntBASIC21.57■■□□□ 1.04
RDH11Q8TC12 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.56■■□□□ 1.04
RDH11Q8TC12 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RDH11Q8TC12 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RDH11Q8TC12 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RDH11Q8TC12 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RDH11Q8TC12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RDH11Q8TC12 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.55■■□□□ 1.04
RDH11Q8TC12 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RDH11Q8TC12 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RDH11Q8TC12 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.55■■□□□ 1.04
RDH11Q8TC12 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.55■■□□□ 1.04
RDH11Q8TC12 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms