Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 AC106739.1-201ENST00000617035 715 ntBASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
SMARCC2Q8TAQ2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.72
SMARCC2Q8TAQ2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.76■■□□□ 1.72
SMARCC2Q8TAQ2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 AC009086.3-201ENST00000623486 1008 ntBASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 AC135279.3-201ENST00000610945 1311 ntBASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.76■■□□□ 1.71
SMARCC2Q8TAQ2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 AC139530.1-201ENST00000575312 1977 ntBASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 AC019069.1-201ENST00000610008 1333 ntBASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 AC024257.2-201ENST00000549699 147 ntBASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC2Q8TAQ2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 SERBP1P1-201ENST00000396021 1160 ntBASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 AC006455.2-201ENST00000429931 906 ntBASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC2Q8TAQ2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SMARCC2Q8TAQ2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 AC133561.4-201ENST00000566112 224 ntBASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 AC080038.3-201ENST00000623346 1952 ntBASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC2Q8TAQ2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 AC005837.3-201ENST00000612163 286 ntBASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.71■■□□□ 1.71
SMARCC2Q8TAQ2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC2Q8TAQ2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms