Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 SRD5A1P1-201ENST00000442297 786 ntBASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 AC080038.3-201ENST00000623346 1952 ntBASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH19Q8TAB3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 AC242852.2-201ENST00000615738 1807 ntBASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH19Q8TAB3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 MIR3181-201ENST00000578512 73 ntBASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 LINC00526-201ENST00000581067 1875 ntBASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 AC133637.1-201ENST00000624115 1537 ntBASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH19Q8TAB3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
PCDH19Q8TAB3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH19Q8TAB3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH19Q8TAB3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH19Q8TAB3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.23
PCDH19Q8TAB3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH19Q8TAB3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 AC139530.1-201ENST00000575312 1977 ntBASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH19Q8TAB3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 AL139246.5-201ENST00000606645 996 ntBASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH19Q8TAB3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 MIR638-201ENST00000385237 100 ntBASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH19Q8TAB3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms