Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF563Q8TA94 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 MIR4466-201ENST00000606121 54 ntBASIC20.13■□□□□ 0.81
ZNF563Q8TA94 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF563Q8TA94 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 AL499627.2-201ENST00000606283 725 ntBASIC20.12■□□□□ 0.81
ZNF563Q8TA94 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.12■□□□□ 0.81
ZNF563Q8TA94 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF563Q8TA94 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF563Q8TA94 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 AL136116.3-201ENST00000402907 1138 ntBASIC20.1■□□□□ 0.81
ZNF563Q8TA94 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 ESRRAP2-201ENST00000418437 1549 ntBASIC20.1■□□□□ 0.81
ZNF563Q8TA94 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.1■□□□□ 0.81
ZNF563Q8TA94 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ZNF563Q8TA94 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
ZNF563Q8TA94 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 SYT6-210ENST00000641643 1587 ntBASIC20.08■□□□□ 0.81
ZNF563Q8TA94 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 AC133637.1-201ENST00000624115 1537 ntBASIC20.08■□□□□ 0.81
ZNF563Q8TA94 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 DUX4L19-201ENST00000557448 1267 ntBASIC20.08■□□□□ 0.81
ZNF563Q8TA94 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF563Q8TA94 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms