Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 AC004854.2-201ENST00000608450 1441 ntBASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.19■■□□□ 1.62
SHCBP1Q8NEM2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 HLA-L-209ENST00000420110 1011 ntBASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.18■■□□□ 1.62
SHCBP1Q8NEM2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 CDCA4P2-201ENST00000441182 718 ntBASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 AC073111.5-205ENST00000641717 521 ntBASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SHCBP1Q8NEM2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHCBP1Q8NEM2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHCBP1Q8NEM2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.15■■□□□ 1.62
SHCBP1Q8NEM2 KRT19P1-201ENST00000405746 1186 ntBASIC25.15■■□□□ 1.62
SHCBP1Q8NEM2 AL353803.4-201ENST00000565882 1934 ntBASIC25.15■■□□□ 1.62
SHCBP1Q8NEM2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.15■■□□□ 1.62
SHCBP1Q8NEM2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.15■■□□□ 1.62
SHCBP1Q8NEM2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.14■■□□□ 1.62
SHCBP1Q8NEM2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.14■■□□□ 1.61
SHCBP1Q8NEM2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.14■■□□□ 1.61
SHCBP1Q8NEM2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SHCBP1Q8NEM2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHCBP1Q8NEM2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHCBP1Q8NEM2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 OXCT2P1-201ENST00000447263 1535 ntBASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 AC020928.2-201ENST00000588717 2197 ntBASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.13■■□□□ 1.61
SHCBP1Q8NEM2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 BID-214ENST00000617586 542 ntTSL 5 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.12■■□□□ 1.61
SHCBP1Q8NEM2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 AC026185.1-201ENST00000445748 174 ntBASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHCBP1Q8NEM2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 LINC01124-201ENST00000409786 2117 ntBASIC25.1■■□□□ 1.61
SHCBP1Q8NEM2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms