Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 MIR4787-201ENST00000607364 84 ntBASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM116Q8NCL8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM116Q8NCL8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM116Q8NCL8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM116Q8NCL8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TMEM116Q8NCL8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM116Q8NCL8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 AC092028.1-203ENST00000608262 953 ntBASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 AC092053.2-201ENST00000640557 1818 ntBASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 AC087742.1-201ENST00000575880 1738 ntBASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM116Q8NCL8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 AC139530.1-201ENST00000575312 1977 ntBASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM116Q8NCL8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM116Q8NCL8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms