Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 AL138724.1-201ENST00000606771 1088 ntBASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT4Q8N9R6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 SYT6-210ENST00000641643 1587 ntBASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT4Q8N9R6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 AC242852.2-201ENST00000615738 1807 ntBASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 AL136116.3-201ENST00000402907 1138 ntBASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT4Q8N9R6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.4■□□□□ 0.86
CDRT4Q8N9R6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDRT4Q8N9R6 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.4■□□□□ 0.86
CDRT4Q8N9R6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT4Q8N9R6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT4Q8N9R6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDRT4Q8N9R6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDRT4Q8N9R6 ECEL1P1-201ENST00000373592 1742 ntBASIC20.39■□□□□ 0.86
CDRT4Q8N9R6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 SERBP1P1-201ENST00000396021 1160 ntBASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.39■□□□□ 0.85
CDRT4Q8N9R6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 AC079834.2-201ENST00000609776 1949 ntBASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CDRT4Q8N9R6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 OR2I1P-207ENST00000453522 948 ntBASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDRT4Q8N9R6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms