Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC170Q8IYT3 AC103724.3-201ENST00000564481 992 ntBASIC23.6■■□□□ 1.37
CCDC170Q8IYT3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC170Q8IYT3 AC010542.4-201ENST00000563151 1910 ntBASIC23.6■■□□□ 1.37
CCDC170Q8IYT3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC170Q8IYT3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC170Q8IYT3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 AC026310.3-201ENST00000625186 2373 ntBASIC23.59■■□□□ 1.37
CCDC170Q8IYT3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC170Q8IYT3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CCDC170Q8IYT3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC170Q8IYT3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC170Q8IYT3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.58■■□□□ 1.36
CCDC170Q8IYT3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.58■■□□□ 1.36
CCDC170Q8IYT3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.58■■□□□ 1.36
CCDC170Q8IYT3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 FAM99A-202ENST00000538190 1989 ntBASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CCDC170Q8IYT3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC170Q8IYT3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 YBX1P4-201ENST00000392794 808 ntBASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC170Q8IYT3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 CA15P2-201ENST00000611168 834 ntBASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC170Q8IYT3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC170Q8IYT3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.52■■□□□ 1.36
CCDC170Q8IYT3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms