Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
COL23A1Q86Y22 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.05■■■□□ 2.08
COL23A1Q86Y22 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.05■■■□□ 2.08
COL23A1Q86Y22 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.05■■■□□ 2.08
COL23A1Q86Y22 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL23A1Q86Y22 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.05■■■□□ 2.08
COL23A1Q86Y22 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
COL23A1Q86Y22 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 AC007322.1-201ENST00000426983 750 ntBASIC28.03■■■□□ 2.08
COL23A1Q86Y22 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL23A1Q86Y22 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 ARL16-209ENST00000573715 763 ntTSL 3 BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 ARL16-211ENST00000576135 694 ntTSL 3 BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL23A1Q86Y22 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL23A1Q86Y22 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.01■■■□□ 2.07
COL23A1Q86Y22 SLC29A4P1-201ENST00000398760 971 ntBASIC28.01■■■□□ 2.07
COL23A1Q86Y22 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.01■■■□□ 2.07
COL23A1Q86Y22 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.01■■■□□ 2.07
COL23A1Q86Y22 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.01■■■□□ 2.07
COL23A1Q86Y22 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL23A1Q86Y22 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
COL23A1Q86Y22 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28■■■□□ 2.07
COL23A1Q86Y22 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28■■■□□ 2.07
COL23A1Q86Y22 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28■■■□□ 2.07
COL23A1Q86Y22 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28■■■□□ 2.07
COL23A1Q86Y22 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
COL23A1Q86Y22 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 AC098934.4-201ENST00000564127 592 ntBASIC27.99■■■□□ 2.07
COL23A1Q86Y22 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 AC087239.1-201ENST00000622671 572 ntBASIC27.99■■■□□ 2.07
COL23A1Q86Y22 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COL23A1Q86Y22 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL23A1Q86Y22 AC135731.1-201ENST00000569415 2548 ntBASIC27.97■■■□□ 2.07
COL23A1Q86Y22 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL23A1Q86Y22 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL23A1Q86Y22 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
COL23A1Q86Y22 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL23A1Q86Y22 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.97■■■□□ 2.07
COL23A1Q86Y22 AC104187.1-201ENST00000607510 612 ntBASIC27.97■■■□□ 2.07
COL23A1Q86Y22 AC133041.1-202ENST00000642053 222 ntBASIC27.97■■■□□ 2.07
COL23A1Q86Y22 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL23A1Q86Y22 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL23A1Q86Y22 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL23A1Q86Y22 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL23A1Q86Y22 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.95■■■□□ 2.06
COL23A1Q86Y22 POU5F1P3-201ENST00000428824 1078 ntBASIC27.95■■■□□ 2.06
COL23A1Q86Y22 AC073210.2-201ENST00000430369 194 ntBASIC27.95■■■□□ 2.06
COL23A1Q86Y22 UBE2DNL-204ENST00000602536 740 ntBASIC27.95■■■□□ 2.06
COL23A1Q86Y22 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
COL23A1Q86Y22 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms