Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.2■□□□□ 0.99
HIST2H2AA3Q6FI13 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HIST2H2AA3Q6FI13 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HIST2H2AA3Q6FI13 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2AA3Q6FI13 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 AC006455.2-201ENST00000429931 906 ntBASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2AA3Q6FI13 AL117328.2-201ENST00000624617 1940 ntBASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 DUX4L19-201ENST00000557448 1267 ntBASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 AC131212.1-201ENST00000613771 668 ntBASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 AC133637.1-201ENST00000624115 1537 ntBASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H2AA3Q6FI13 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 MIR4466-201ENST00000606121 54 ntBASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 LINC01960-201ENST00000563759 1884 ntBASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2AA3Q6FI13 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 AC127496.7-201ENST00000625110 1798 ntBASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 AC131281.2-201ENST00000520478 145 ntBASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2AA3Q6FI13 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 GUSBP5-202ENST00000510805 1989 ntBASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2AA3Q6FI13 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIST2H2AA3Q6FI13 SYT6-210ENST00000641643 1587 ntBASIC21.14■□□□□ 0.98
HIST2H2AA3Q6FI13 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIST2H2AA3Q6FI13 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIST2H2AA3Q6FI13 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.14■□□□□ 0.98
HIST2H2AA3Q6FI13 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms