Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 NTF6G-201ENST00000591094 616 ntBASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.91■□□□□ 0.78
RNFT1Q5M7Z0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 AL137784.2-201ENST00000607332 1000 ntBASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNFT1Q5M7Z0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 RARRES2P11-201ENST00000635158 484 ntBASIC19.89■□□□□ 0.77
RNFT1Q5M7Z0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 KRT18P61-201ENST00000585825 1298 ntBASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNFT1Q5M7Z0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.87■□□□□ 0.77
RNFT1Q5M7Z0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 AC090192.1-201ENST00000517740 490 ntBASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNFT1Q5M7Z0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 AC004911.1-201ENST00000416316 871 ntBASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 AC068587.7-201ENST00000641602 218 ntBASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 ANOS2P-203ENST00000472227 1816 ntBASIC19.85■□□□□ 0.77
RNFT1Q5M7Z0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms