Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 KRT8P33-201ENST00000508125 1423 ntBASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.76■□□□□ 0.91
RUNDC3AQ59EK9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 LINC01960-201ENST00000563759 1884 ntBASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 YBX1P4-201ENST00000392794 808 ntBASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 AL033527.3-201ENST00000566366 1196 ntBASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 AC009086.3-201ENST00000623486 1008 ntBASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 AC012354.3-201ENST00000623734 483 ntBASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
RUNDC3AQ59EK9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
RUNDC3AQ59EK9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RUNDC3AQ59EK9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 AC010542.4-201ENST00000563151 1910 ntBASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 AC021242.3-201ENST00000607598 1377 ntBASIC20.72■□□□□ 0.91
RUNDC3AQ59EK9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.71■□□□□ 0.91
RUNDC3AQ59EK9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 AL031848.2-201ENST00000607670 837 ntBASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 AC026310.3-201ENST00000625186 2373 ntBASIC20.7■□□□□ 0.9
RUNDC3AQ59EK9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms