Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.09■□□□□ 0.97
PDCD4Q53EL6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDCD4Q53EL6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 YBX1P4-201ENST00000392794 808 ntBASIC21.08■□□□□ 0.97
PDCD4Q53EL6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.08■□□□□ 0.97
PDCD4Q53EL6 AC009086.3-201ENST00000623486 1008 ntBASIC21.08■□□□□ 0.97
PDCD4Q53EL6 AC012354.3-201ENST00000623734 483 ntBASIC21.08■□□□□ 0.97
PDCD4Q53EL6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
PDCD4Q53EL6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 LINC01960-201ENST00000563759 1884 ntBASIC21.07■□□□□ 0.96
PDCD4Q53EL6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 DUX4L4-201ENST00000566884 1269 ntBASIC21.07■□□□□ 0.96
PDCD4Q53EL6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.07■□□□□ 0.96
PDCD4Q53EL6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDCD4Q53EL6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 KRT8P33-201ENST00000508125 1423 ntBASIC21.05■□□□□ 0.96
PDCD4Q53EL6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDCD4Q53EL6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.04■□□□□ 0.96
PDCD4Q53EL6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 RNF165-205ENST00000588679 2904 ntBASIC21.03■□□□□ 0.96
PDCD4Q53EL6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 AC021242.3-201ENST00000607598 1377 ntBASIC21.03■□□□□ 0.96
PDCD4Q53EL6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 AL033527.3-201ENST00000566366 1196 ntBASIC21.03■□□□□ 0.96
PDCD4Q53EL6 AL031848.2-201ENST00000607670 837 ntBASIC21.03■□□□□ 0.96
PDCD4Q53EL6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.03■□□□□ 0.96
PDCD4Q53EL6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms