Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS1Q01581 MIR6724-1-201ENST00000616420 92 ntBASIC21.17■□□□□ 0.98
HMGCS1Q01581 MIR6724-2-201ENST00000616483 92 ntBASIC21.17■□□□□ 0.98
HMGCS1Q01581 MIR6724-4-201ENST00000617390 92 ntBASIC21.17■□□□□ 0.98
HMGCS1Q01581 MIR6724-3-201ENST00000622482 92 ntBASIC21.17■□□□□ 0.98
HMGCS1Q01581 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 LINC01960-201ENST00000563759 1884 ntBASIC21.17■□□□□ 0.98
HMGCS1Q01581 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGCS1Q01581 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HMGCS1Q01581 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.16■□□□□ 0.98
HMGCS1Q01581 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS1Q01581 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS1Q01581 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS1Q01581 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS1Q01581 GUSBP5-201ENST00000418136 578 ntBASIC21.15■□□□□ 0.98
HMGCS1Q01581 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCS1Q01581 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS1Q01581 AC092053.2-201ENST00000640557 1818 ntBASIC21.15■□□□□ 0.98
HMGCS1Q01581 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.14■□□□□ 0.98
HMGCS1Q01581 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.14■□□□□ 0.98
HMGCS1Q01581 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.14■□□□□ 0.98
HMGCS1Q01581 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.14■□□□□ 0.98
HMGCS1Q01581 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
HMGCS1Q01581 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMGCS1Q01581 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
HMGCS1Q01581 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCS1Q01581 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCS1Q01581 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
HMGCS1Q01581 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.14■□□□□ 0.97
HMGCS1Q01581 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.14■□□□□ 0.97
HMGCS1Q01581 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HMGCS1Q01581 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCS1Q01581 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCS1Q01581 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCS1Q01581 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.13■□□□□ 0.97
HMGCS1Q01581 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HMGCS1Q01581 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 KRT16P3-201ENST00000439127 1283 ntBASIC21.13■□□□□ 0.97
HMGCS1Q01581 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGCS1Q01581 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HMGCS1Q01581 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
HMGCS1Q01581 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCS1Q01581 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCS1Q01581 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMGCS1Q01581 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
HMGCS1Q01581 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HMGCS1Q01581 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCS1Q01581 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCS1Q01581 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCS1Q01581 AL117332.1-201ENST00000622628 974 ntBASIC21.11■□□□□ 0.97
HMGCS1Q01581 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HMGCS1Q01581 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCS1Q01581 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCS1Q01581 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCS1Q01581 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCS1Q01581 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCS1Q01581 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCS1Q01581 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCS1Q01581 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms