Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCR4P61073 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.02■□□□□ 0.8
CXCR4P61073 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCR4P61073 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCR4P61073 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CXCR4P61073 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
CXCR4P61073 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCR4P61073 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CXCR4P61073 AC022616.5-201ENST00000518796 181 ntBASIC20.01■□□□□ 0.79
CXCR4P61073 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCR4P61073 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.01■□□□□ 0.79
CXCR4P61073 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CXCR4P61073 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CXCR4P61073 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCR4P61073 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CXCR4P61073 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCR4P61073 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20■□□□□ 0.79
CXCR4P61073 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20■□□□□ 0.79
CXCR4P61073 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 AC139795.1-202ENST00000500444 432 ntBASIC20■□□□□ 0.79
CXCR4P61073 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20■□□□□ 0.79
CXCR4P61073 HSD17B1P1-201ENST00000590052 955 ntBASIC20■□□□□ 0.79
CXCR4P61073 AC019171.1-201ENST00000601251 1056 ntBASIC20■□□□□ 0.79
CXCR4P61073 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20■□□□□ 0.79
CXCR4P61073 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20■□□□□ 0.79
CXCR4P61073 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CXCR4P61073 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CXCR4P61073 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.99■□□□□ 0.79
CXCR4P61073 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CXCR4P61073 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCR4P61073 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCR4P61073 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCR4P61073 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCR4P61073 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CXCR4P61073 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCR4P61073 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.98■□□□□ 0.79
CXCR4P61073 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CXCR4P61073 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCR4P61073 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.98■□□□□ 0.79
CXCR4P61073 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.98■□□□□ 0.79
CXCR4P61073 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.98■□□□□ 0.79
CXCR4P61073 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CXCR4P61073 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.98■□□□□ 0.79
CXCR4P61073 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.98■□□□□ 0.79
CXCR4P61073 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
CXCR4P61073 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCR4P61073 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCR4P61073 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CXCR4P61073 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCR4P61073 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCR4P61073 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCR4P61073 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.97■□□□□ 0.79
CXCR4P61073 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CXCR4P61073 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.97■□□□□ 0.79
CXCR4P61073 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CXCR4P61073 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CXCR4P61073 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCR4P61073 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCR4P61073 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.97■□□□□ 0.79
CXCR4P61073 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.96■□□□□ 0.79
CXCR4P61073 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CXCR4P61073 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CXCR4P61073 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CXCR4P61073 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.96■□□□□ 0.79
CXCR4P61073 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
CXCR4P61073 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 DUX4L18-201ENST00000553347 1267 ntBASIC19.96■□□□□ 0.79
CXCR4P61073 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CXCR4P61073 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCR4P61073 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CXCR4P61073 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCR4P61073 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CXCR4P61073 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCR4P61073 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms