Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2DP55273 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2DP55273 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKN2DP55273 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDKN2DP55273 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
CDKN2DP55273 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.76■■□□□ 1.07
CDKN2DP55273 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.76■■□□□ 1.07
CDKN2DP55273 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.76■■□□□ 1.07
CDKN2DP55273 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.76■■□□□ 1.07
CDKN2DP55273 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDKN2DP55273 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2DP55273 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2DP55273 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.75■■□□□ 1.07
CDKN2DP55273 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.75■■□□□ 1.07
CDKN2DP55273 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2DP55273 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CDKN2DP55273 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2DP55273 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.75■■□□□ 1.07
CDKN2DP55273 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.75■■□□□ 1.07
CDKN2DP55273 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2DP55273 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDKN2DP55273 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDKN2DP55273 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDKN2DP55273 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2DP55273 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDKN2DP55273 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2DP55273 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDKN2DP55273 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CDKN2DP55273 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.74■■□□□ 1.07
CDKN2DP55273 AL356441.2-201ENST00000443009 864 ntBASIC21.74■■□□□ 1.07
CDKN2DP55273 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.74■■□□□ 1.07
CDKN2DP55273 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2DP55273 AC241377.3-202ENST00000626088 1088 ntBASIC21.74■■□□□ 1.07
CDKN2DP55273 AC241585.3-202ENST00000628937 1088 ntBASIC21.74■■□□□ 1.07
CDKN2DP55273 AC245100.8-202ENST00000629247 1058 ntBASIC21.74■■□□□ 1.07
CDKN2DP55273 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2DP55273 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2DP55273 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.74■■□□□ 1.07
CDKN2DP55273 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.74■■□□□ 1.07
CDKN2DP55273 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDKN2DP55273 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.74■■□□□ 1.07
CDKN2DP55273 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDKN2DP55273 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2DP55273 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.73■■□□□ 1.07
CDKN2DP55273 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CDKN2DP55273 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDKN2DP55273 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.73■■□□□ 1.07
CDKN2DP55273 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CDKN2DP55273 AC099791.2-201ENST00000605725 427 ntBASIC21.73■■□□□ 1.07
CDKN2DP55273 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
CDKN2DP55273 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2DP55273 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2DP55273 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDKN2DP55273 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDKN2DP55273 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.72■■□□□ 1.07
CDKN2DP55273 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDKN2DP55273 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.72■■□□□ 1.07
CDKN2DP55273 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDKN2DP55273 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.72■■□□□ 1.07
CDKN2DP55273 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDKN2DP55273 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.71■■□□□ 1.07
CDKN2DP55273 AC092053.2-201ENST00000640557 1818 ntBASIC21.71■■□□□ 1.07
CDKN2DP55273 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.71■■□□□ 1.07
CDKN2DP55273 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.71■■□□□ 1.07
CDKN2DP55273 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 AC137767.1-201ENST00000602918 1920 ntBASIC21.71■■□□□ 1.07
CDKN2DP55273 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.71■■□□□ 1.07
CDKN2DP55273 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.71■■□□□ 1.07
CDKN2DP55273 AL512631.2-201ENST00000604634 923 ntBASIC21.71■■□□□ 1.07
CDKN2DP55273 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDKN2DP55273 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN2DP55273 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDKN2DP55273 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.71■■□□□ 1.07
CDKN2DP55273 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CDKN2DP55273 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
CDKN2DP55273 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
CDKN2DP55273 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CDKN2DP55273 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDKN2DP55273 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDKN2DP55273 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDKN2DP55273 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms