Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC34P49427 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC34P49427 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDC34P49427 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC34P49427 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC34P49427 AC087742.1-201ENST00000575880 1738 ntBASIC17.33■□□□□ 0.36
CDC34P49427 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC34P49427 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 ABHD17AP4-201ENST00000411545 909 ntBASIC17.32■□□□□ 0.36
CDC34P49427 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC34P49427 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC34P49427 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDC34P49427 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC34P49427 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC34P49427 AC010542.4-201ENST00000563151 1910 ntBASIC17.31■□□□□ 0.36
CDC34P49427 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDC34P49427 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.31■□□□□ 0.36
CDC34P49427 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDC34P49427 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDC34P49427 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC34P49427 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.3■□□□□ 0.36
CDC34P49427 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC34P49427 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDC34P49427 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDC34P49427 AC018755.3-202ENST00000596210 929 ntBASIC17.3■□□□□ 0.36
CDC34P49427 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC34P49427 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC34P49427 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CDC34P49427 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDC34P49427 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC34P49427 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC34P49427 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDC34P49427 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 AC009831.1-201ENST00000580420 1582 ntBASIC17.29■□□□□ 0.36
CDC34P49427 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC34P49427 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC34P49427 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDC34P49427 AC011551.1-201ENST00000614101 683 ntBASIC17.29■□□□□ 0.36
CDC34P49427 AC133552.2-201ENST00000619106 1032 ntBASIC17.29■□□□□ 0.36
CDC34P49427 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC34P49427 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
CDC34P49427 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC34P49427 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDC34P49427 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDC34P49427 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC34P49427 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDC34P49427 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC34P49427 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.28■□□□□ 0.36
CDC34P49427 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDC34P49427 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 AC087393.1-201ENST00000582896 145 ntBASIC17.28■□□□□ 0.36
CDC34P49427 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDC34P49427 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDC34P49427 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.28■□□□□ 0.36
CDC34P49427 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC34P49427 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.27■□□□□ 0.36
CDC34P49427 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDC34P49427 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDC34P49427 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.27■□□□□ 0.36
CDC34P49427 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC34P49427 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CDC34P49427 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.27■□□□□ 0.36
CDC34P49427 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms