Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YGR011WYGR011W 327 nt4.36□□□□□ -1.71
RTR1P40084 SAE3YHR079C-A 276 nt4.36□□□□□ -1.71
RTR1P40084 SET6YPL165C 1122 nt4.36□□□□□ -1.71
RTR1P40084 MTH1YDR277C 1302 nt4.36□□□□□ -1.71
RTR1P40084 ASI1YMR119W 1875 nt4.36□□□□□ -1.71
RTR1P40084 FMP30YPL103C 1407 nt4.36□□□□□ -1.71
RTR1P40084 BOI2YER114C 3123 nt4.35□□□□□ -1.71
RTR1P40084 ILV5YLR355C 1188 nt4.35□□□□□ -1.71
RTR1P40084 SHQ1YIL104C 1524 nt4.35□□□□□ -1.71
RTR1P40084 GDE1YPL110C 3672 nt4.34□□□□□ -1.71
RTR1P40084 YDR090CYDR090C 933 nt4.34□□□□□ -1.71
RTR1P40084 SNM1YDR478W 597 nt4.34□□□□□ -1.71
RTR1P40084 PIR3YKL163W 978 nt4.34□□□□□ -1.71
RTR1P40084 ECM4YKR076W 1113 nt4.34□□□□□ -1.71
RTR1P40084 IMP4YNL075W 873 nt4.34□□□□□ -1.71
RTR1P40084 ATG8YBL078C 354 nt4.34□□□□□ -1.71
RTR1P40084 PNG1YPL096W 1092 nt4.34□□□□□ -1.71
RTR1P40084 NCE102YPR149W 522 nt4.34□□□□□ -1.71
RTR1P40084 OM14YBR230C 405 nt4.34□□□□□ -1.71
RTR1P40084 TAF12YDR145W 1620 nt4.34□□□□□ -1.71
RTR1P40084 POL12YBL035C 2118 nt4.34□□□□□ -1.71
RTR1P40084 SSM4YIL030C 3960 nt4.34□□□□□ -1.72
RTR1P40084 GAS5YOL030W 1455 nt4.33□□□□□ -1.72
RTR1P40084 RRP17YDR412W 708 nt4.33□□□□□ -1.72
RTR1P40084 LPP1YDR503C 825 nt4.33□□□□□ -1.72
RTR1P40084 SSA2YLL024C 1920 nt4.33□□□□□ -1.72
RTR1P40084 SRB5YGR104C 924 nt4.32□□□□□ -1.72
RTR1P40084 MHO1YJR008W 1017 nt4.32□□□□□ -1.72
RTR1P40084 YLR036CYLR036C 612 nt4.32□□□□□ -1.72
RTR1P40084 IMP2YMR035W 534 nt4.32□□□□□ -1.72
RTR1P40084 GLN4YOR168W 2430 nt4.32□□□□□ -1.72
RTR1P40084 CDC6YJL194W 1542 nt4.31□□□□□ -1.72
RTR1P40084 YER134CYER134C 537 nt4.31□□□□□ -1.72
RTR1P40084 MNN1YER001W 2289 nt4.31□□□□□ -1.72
RTR1P40084 YPR022CYPR022C 3402 nt4.31□□□□□ -1.72
RTR1P40084 YPR003CYPR003C 2265 nt4.3□□□□□ -1.72
RTR1P40084 TMN2YDR107C 2019 nt4.3□□□□□ -1.72
RTR1P40084 UBC1YDR177W 648 nt4.3□□□□□ -1.72
RTR1P40084 YIL163CYIL163C 354 nt4.3□□□□□ -1.72
RTR1P40084 YPR174CYPR174C 666 nt4.3□□□□□ -1.72
RTR1P40084 RSF2YJR127C 4143 nt4.3□□□□□ -1.72
RTR1P40084 PMT6YGR199W 2280 nt4.3□□□□□ -1.72
RTR1P40084 OPT2YPR194C 2634 nt4.3□□□□□ -1.72
RTR1P40084 SAT4YCR008W 1812 nt4.3□□□□□ -1.72
RTR1P40084 COS4YFL062W 1140 nt4.29□□□□□ -1.72
RTR1P40084 GTT1YIR038C 705 nt4.29□□□□□ -1.72
RTR1P40084 RPS0BYLR048W 759 nt4.29□□□□□ -1.72
RTR1P40084 COS3YML132W 1140 nt4.29□□□□□ -1.72
RTR1P40084 COS2YBR302C 1140 nt4.29□□□□□ -1.72
RTR1P40084 DAN4YJR151C 3486 nt4.29□□□□□ -1.72
RTR1P40084 ARO9YHR137W 1542 nt4.29□□□□□ -1.72
RTR1P40084 NTH1YDR001C 2256 nt4.29□□□□□ -1.72
RTR1P40084 MSR1YHR091C 1932 nt4.29□□□□□ -1.72
RTR1P40084 IME4YGL192W 1803 nt4.28□□□□□ -1.72
RTR1P40084 EXO5YBR163W 1758 nt4.28□□□□□ -1.72
RTR1P40084 YML020WYML020W 1995 nt4.28□□□□□ -1.72
RTR1P40084 RPP1AYDL081C 321 nt4.28□□□□□ -1.72
RTR1P40084 YOL035CYOL035C 303 nt4.28□□□□□ -1.72
RTR1P40084 YPR108W-AYPR108W-A 213 nt4.28□□□□□ -1.72
RTR1P40084 NUP60YAR002W 1620 nt4.28□□□□□ -1.72
RTR1P40084 YNR063WYNR063W 1824 nt4.28□□□□□ -1.72
RTR1P40084 MAD3YJL013C 1548 nt4.27□□□□□ -1.73
RTR1P40084 INN1YNL152W 1230 nt4.27□□□□□ -1.73
RTR1P40084 MRPL51YPR100W 423 nt4.27□□□□□ -1.73
RTR1P40084 SSB1YDL229W 1842 nt4.27□□□□□ -1.73
RTR1P40084 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
RTR1P40084 RMD1YDL001W 1293 nt4.26□□□□□ -1.73
RTR1P40084 GTF1YGR102C 552 nt4.26□□□□□ -1.73
RTR1P40084 IDP2YLR174W 1239 nt4.26□□□□□ -1.73
RTR1P40084 RAD14YMR201C 1116 nt4.26□□□□□ -1.73
RTR1P40084 CKS1YBR135W 453 nt4.26□□□□□ -1.73
RTR1P40084 CDC9YDL164C 2268 nt4.26□□□□□ -1.73
RTR1P40084 VPS36YLR417W 1701 nt4.26□□□□□ -1.73
RTR1P40084 YTM1YOR272W 1383 nt4.26□□□□□ -1.73
RTR1P40084 AKR1YDR264C 2295 nt4.25□□□□□ -1.73
RTR1P40084 PCL10YGL134W 1302 nt4.25□□□□□ -1.73
RTR1P40084 RPA135YPR010C 3612 nt4.25□□□□□ -1.73
RTR1P40084 LCB5YLR260W 2064 nt4.25□□□□□ -1.73
RTR1P40084 YDR193WYDR193W 399 nt4.25□□□□□ -1.73
RTR1P40084 REE1YJL217W 597 nt4.25□□□□□ -1.73
RTR1P40084 ENT3YJR125C 1227 nt4.25□□□□□ -1.73
RTR1P40084 YLR374CYLR374C 390 nt4.25□□□□□ -1.73
RTR1P40084 YMR122W-AYMR122W-A 255 nt4.25□□□□□ -1.73
RTR1P40084 MDM12YOL009C 816 nt4.25□□□□□ -1.73
RTR1P40084 YCL022CYCL022C 516 nt4.25□□□□□ -1.73
RTR1P40084 MDN1YLR106C 14733 nt4.25□□□□□ -1.73
RTR1P40084 RPN5YDL147W 1338 nt4.24□□□□□ -1.73
RTR1P40084 ALR2YFL050C 2577 nt4.24□□□□□ -1.73
RTR1P40084 OPI6YDL096C 327 nt4.24□□□□□ -1.73
RTR1P40084 DAS2YDR020C 699 nt4.24□□□□□ -1.73
RTR1P40084 COS6YGR295C 1146 nt4.24□□□□□ -1.73
RTR1P40084 GRE3YHR104W 984 nt4.24□□□□□ -1.73
RTR1P40084 TPM1YNL079C 600 nt4.24□□□□□ -1.73
RTR1P40084 FYV5YCL058C 459 nt4.24□□□□□ -1.73
RTR1P40084 MDL1YLR188W 2088 nt4.24□□□□□ -1.73
RTR1P40084 tC(GCA)BtC(GCA)B 72 nt4.23□□□□□ -1.73
RTR1P40084 tC(GCA)GtC(GCA)G 72 nt4.23□□□□□ -1.73
RTR1P40084 tC(GCA)P1tC(GCA)P1 72 nt4.23□□□□□ -1.73
RTR1P40084 tC(GCA)P2tC(GCA)P2 72 nt4.23□□□□□ -1.73
RTR1P40084 BCD1YHR040W 1101 nt4.23□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms