Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.95■■□□□ 1.11
HMGCLP35914 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
HMGCLP35914 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
HMGCLP35914 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLP35914 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLP35914 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLP35914 SLC47A1P1-202ENST00000449666 945 ntBASIC21.95■■□□□ 1.1
HMGCLP35914 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.95■■□□□ 1.1
HMGCLP35914 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.95■■□□□ 1.1
HMGCLP35914 AL031602.1-201ENST00000633169 911 ntBASIC21.95■■□□□ 1.1
HMGCLP35914 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLP35914 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLP35914 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLP35914 ESRRAP2-201ENST00000418437 1549 ntBASIC21.95■■□□□ 1.1
HMGCLP35914 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.94■■□□□ 1.1
HMGCLP35914 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.94■■□□□ 1.1
HMGCLP35914 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 AC133561.1-201ENST00000568600 2415 ntBASIC21.94■■□□□ 1.1
HMGCLP35914 BX842568.3-201ENST00000418104 571 ntBASIC21.94■■□□□ 1.1
HMGCLP35914 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 AC010525.1-201ENST00000585559 441 ntBASIC21.94■■□□□ 1.1
HMGCLP35914 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.94■■□□□ 1.1
HMGCLP35914 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HMGCLP35914 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HMGCLP35914 AC087742.1-201ENST00000575880 1738 ntBASIC21.94■■□□□ 1.1
HMGCLP35914 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
HMGCLP35914 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGCLP35914 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.94■■□□□ 1.1
HMGCLP35914 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HMGCLP35914 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLP35914 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
HMGCLP35914 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLP35914 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.93■■□□□ 1.1
HMGCLP35914 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
HMGCLP35914 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.93■■□□□ 1.1
HMGCLP35914 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HMGCLP35914 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
HMGCLP35914 AL355001.2-201ENST00000620617 1191 ntBASIC21.93■■□□□ 1.1
HMGCLP35914 AC068587.7-201ENST00000641602 218 ntBASIC21.93■■□□□ 1.1
HMGCLP35914 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HMGCLP35914 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HMGCLP35914 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.92■■□□□ 1.1
HMGCLP35914 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HMGCLP35914 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
HMGCLP35914 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLP35914 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HMGCLP35914 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGCLP35914 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.92■■□□□ 1.1
HMGCLP35914 AC233992.3-201ENST00000607491 485 ntBASIC21.92■■□□□ 1.1
HMGCLP35914 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
HMGCLP35914 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLP35914 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLP35914 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLP35914 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.91■■□□□ 1.1
HMGCLP35914 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLP35914 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.91■■□□□ 1.1
HMGCLP35914 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HMGCLP35914 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.91■■□□□ 1.1
HMGCLP35914 AL031432.3-201ENST00000607698 485 ntBASIC21.91■■□□□ 1.1
HMGCLP35914 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.91■■□□□ 1.1
HMGCLP35914 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.91■■□□□ 1.1
HMGCLP35914 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HMGCLP35914 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.91■■□□□ 1.1
HMGCLP35914 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLP35914 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLP35914 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLP35914 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLP35914 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLP35914 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLP35914 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HMGCLP35914 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.9■■□□□ 1.1
HMGCLP35914 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.9■■□□□ 1.1
HMGCLP35914 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGCLP35914 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLP35914 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
HMGCLP35914 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGCLP35914 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
HMGCLP35914 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGCLP35914 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.89■■□□□ 1.09
HMGCLP35914 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HMGCLP35914 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLP35914 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCLP35914 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms