Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 HMF1YER057C 390 nt5.04□□□□□ -1.6
UFD4P33202 tQ(UUG)BtQ(UUG)B 72 nt5.04□□□□□ -1.6
UFD4P33202 RHO3YIL118W 696 nt5.04□□□□□ -1.6
UFD4P33202 ARO4YBR249C 1113 nt5.04□□□□□ -1.6
UFD4P33202 ORC1YML065W 2745 nt5.04□□□□□ -1.6
UFD4P33202 YME2YMR302C 2553 nt5.04□□□□□ -1.6
UFD4P33202 DNM1YLL001W 2274 nt5.03□□□□□ -1.6
UFD4P33202 CLD1YGR110W 1338 nt5.03□□□□□ -1.6
UFD4P33202 ASI1YMR119W 1875 nt5.03□□□□□ -1.6
UFD4P33202 NOP2YNL061W 1857 nt5.03□□□□□ -1.6
UFD4P33202 ARO9YHR137W 1542 nt5.03□□□□□ -1.6
UFD4P33202 PRP40YKL012W 1752 nt5.03□□□□□ -1.6
UFD4P33202 RTK1YDL025C 1863 nt5.03□□□□□ -1.6
UFD4P33202 THR4YCR053W 1545 nt5.02□□□□□ -1.61
UFD4P33202 RPL30YGL030W 318 nt5.02□□□□□ -1.61
UFD4P33202 ECM34YHL043W 513 nt5.02□□□□□ -1.61
UFD4P33202 VPS21YOR089C 633 nt5.02□□□□□ -1.61
UFD4P33202 SHG1YBR258C 429 nt5.02□□□□□ -1.61
UFD4P33202 TYW1YPL207W 2433 nt5.02□□□□□ -1.61
UFD4P33202 EMW1YNL313C 2715 nt5.02□□□□□ -1.61
UFD4P33202 ALA1YOR335C 2877 nt5.02□□□□□ -1.61
UFD4P33202 TLG1YDR468C 675 nt5.01□□□□□ -1.61
UFD4P33202 YER134CYER134C 537 nt5.01□□□□□ -1.61
UFD4P33202 TPK2YPL203W 1143 nt5.01□□□□□ -1.61
UFD4P33202 NAB6YML117W 3405 nt5.01□□□□□ -1.61
UFD4P33202 GYP6YJL044C 1377 nt5.01□□□□□ -1.61
UFD4P33202 UBP5YER144C 2418 nt5.01□□□□□ -1.61
UFD4P33202 CUE3YGL110C 1875 nt5.01□□□□□ -1.61
UFD4P33202 GEM1YAL048C 1989 nt5.01□□□□□ -1.61
UFD4P33202 RPP1AYDL081C 321 nt5□□□□□ -1.61
UFD4P33202 SKI6YGR195W 741 nt5□□□□□ -1.61
UFD4P33202 PIR1YKL164C 1026 nt5□□□□□ -1.61
UFD4P33202 PSE1YMR308C 3270 nt5□□□□□ -1.61
UFD4P33202 PPH3YDR075W 927 nt5□□□□□ -1.61
UFD4P33202 MHO1YJR008W 1017 nt5□□□□□ -1.61
UFD4P33202 ENA2YDR039C 3276 nt4.99□□□□□ -1.61
UFD4P33202 ENA1YDR040C 3276 nt4.99□□□□□ -1.61
UFD4P33202 MNL1YHR204W 2391 nt4.99□□□□□ -1.61
UFD4P33202 DNA2YHR164C 4569 nt4.99□□□□□ -1.61
UFD4P33202 YLR374CYLR374C 390 nt4.99□□□□□ -1.61
UFD4P33202 RPL18AYOL120C 561 nt4.99□□□□□ -1.61
UFD4P33202 EPL1YFL024C 2499 nt4.99□□□□□ -1.61
UFD4P33202 BCH1YMR237W 2175 nt4.98□□□□□ -1.61
UFD4P33202 YAL004WYAL004W 648 nt4.98□□□□□ -1.61
UFD4P33202 ENT3YJR125C 1227 nt4.98□□□□□ -1.61
UFD4P33202 RRG9YNL213C 645 nt4.98□□□□□ -1.61
UFD4P33202 DHR2YKL078W 2208 nt4.98□□□□□ -1.61
UFD4P33202 HER2YMR293C 1395 nt4.98□□□□□ -1.61
UFD4P33202 ARR1YPR199C 885 nt4.97□□□□□ -1.61
UFD4P33202 DAN4YJR151C 3486 nt4.96□□□□□ -1.61
UFD4P33202 MIG3YER028C 1185 nt4.96□□□□□ -1.62
UFD4P33202 CAX4YGR036C 720 nt4.95□□□□□ -1.62
UFD4P33202 SED5YLR026C 1023 nt4.95□□□□□ -1.62
UFD4P33202 FMP25YLR077W 1752 nt4.95□□□□□ -1.62
UFD4P33202 FAA2YER015W 2235 nt4.95□□□□□ -1.62
UFD4P33202 FRE8YLR047C 2061 nt4.94□□□□□ -1.62
UFD4P33202 YHR214C-DYHR214C-D 294 nt4.94□□□□□ -1.62
UFD4P33202 YAR069CYAR069C 294 nt4.94□□□□□ -1.62
UFD4P33202 SUI3YPL237W 858 nt4.94□□□□□ -1.62
UFD4P33202 YKL222CYKL222C 2118 nt4.94□□□□□ -1.62
UFD4P33202 MET7YOR241W 1647 nt4.94□□□□□ -1.62
UFD4P33202 YPR108W-AYPR108W-A 213 nt4.94□□□□□ -1.62
UFD4P33202 DPB2YPR175W 2070 nt4.93□□□□□ -1.62
UFD4P33202 SSE2YBR169C 2082 nt4.93□□□□□ -1.62
UFD4P33202 IMD4YML056C 1575 nt4.93□□□□□ -1.62
UFD4P33202 SNF2YOR290C 5112 nt4.92□□□□□ -1.62
UFD4P33202 GCR2YNL199C 1605 nt4.92□□□□□ -1.62
UFD4P33202 OXR1YPL196W 822 nt4.92□□□□□ -1.62
UFD4P33202 TIP20YGL145W 2106 nt4.92□□□□□ -1.62
UFD4P33202 REC8YPR007C 2043 nt4.91□□□□□ -1.62
UFD4P33202 RPL23BYER117W 414 nt4.91□□□□□ -1.62
UFD4P33202 BCD1YHR040W 1101 nt4.91□□□□□ -1.62
UFD4P33202 REE1YJL217W 597 nt4.91□□□□□ -1.62
UFD4P33202 CHO2YGR157W 2610 nt4.9□□□□□ -1.62
UFD4P33202 TMN2YDR107C 2019 nt4.9□□□□□ -1.62
UFD4P33202 SSB1YDL229W 1842 nt4.9□□□□□ -1.62
UFD4P33202 MUP3YHL036W 1641 nt4.9□□□□□ -1.62
UFD4P33202 DOG1YHR044C 741 nt4.9□□□□□ -1.62
UFD4P33202 YMR085WYMR085W 1299 nt4.9□□□□□ -1.62
UFD4P33202 SHH3YMR118C 591 nt4.9□□□□□ -1.62
UFD4P33202 POL31YJR006W 1464 nt4.89□□□□□ -1.63
UFD4P33202 MEK1YOR351C 1494 nt4.89□□□□□ -1.63
UFD4P33202 MCP2YLR253W 1710 nt4.89□□□□□ -1.63
UFD4P33202 YPR003CYPR003C 2265 nt4.89□□□□□ -1.63
UFD4P33202 CDC40YDR364C 1368 nt4.89□□□□□ -1.63
UFD4P33202 FMP30YPL103C 1407 nt4.89□□□□□ -1.63
UFD4P33202 GPI14YJR013W 1212 nt4.88□□□□□ -1.63
UFD4P33202 YOL107WYOL107W 1029 nt4.88□□□□□ -1.63
UFD4P33202 SIS2YKR072C 1689 nt4.88□□□□□ -1.63
UFD4P33202 YGL140CYGL140C 3660 nt4.88□□□□□ -1.63
UFD4P33202 SRP40YKR092C 1221 nt4.88□□□□□ -1.63
UFD4P33202 RPO26YPR187W 468 nt4.88□□□□□ -1.63
UFD4P33202 MNT4YNR059W 1743 nt4.87□□□□□ -1.63
UFD4P33202 TAF1YGR274C 3201 nt4.87□□□□□ -1.63
UFD4P33202 PAU23YLR037C 375 nt4.87□□□□□ -1.63
UFD4P33202 RFM1YOR279C 933 nt4.87□□□□□ -1.63
UFD4P33202 LPP1YDR503C 825 nt4.86□□□□□ -1.63
UFD4P33202 LCL2YLR104W 396 nt4.86□□□□□ -1.63
UFD4P33202 STU2YLR045C 2667 nt4.86□□□□□ -1.63
UFD4P33202 ABP140YOR239W 1887 nt4.86□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms