Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SDHAP31040 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAP31040 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.68■□□□□ 0.74
SDHAP31040 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.68■□□□□ 0.74
SDHAP31040 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAP31040 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SDHAP31040 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAP31040 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.68■□□□□ 0.74
SDHAP31040 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAP31040 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.68■□□□□ 0.74
SDHAP31040 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SDHAP31040 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.68■□□□□ 0.74
SDHAP31040 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAP31040 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SDHAP31040 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.67■□□□□ 0.74
SDHAP31040 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 C11orf96-202ENST00000528572 1834 ntBASIC19.67■□□□□ 0.74
SDHAP31040 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SDHAP31040 AC137767.1-201ENST00000602918 1920 ntBASIC19.67■□□□□ 0.74
SDHAP31040 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.67■□□□□ 0.74
SDHAP31040 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.67■□□□□ 0.74
SDHAP31040 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAP31040 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.66■□□□□ 0.74
SDHAP31040 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SDHAP31040 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.66■□□□□ 0.74
SDHAP31040 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.66■□□□□ 0.74
SDHAP31040 AL117332.1-201ENST00000622628 974 ntBASIC19.66■□□□□ 0.74
SDHAP31040 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHAP31040 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SDHAP31040 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SDHAP31040 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SDHAP31040 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.65■□□□□ 0.74
SDHAP31040 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SDHAP31040 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHAP31040 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SDHAP31040 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.64■□□□□ 0.74
SDHAP31040 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SDHAP31040 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SDHAP31040 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDHAP31040 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.64■□□□□ 0.73
SDHAP31040 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHAP31040 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SDHAP31040 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHAP31040 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.64■□□□□ 0.73
SDHAP31040 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHAP31040 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.64■□□□□ 0.73
SDHAP31040 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.64■□□□□ 0.73
SDHAP31040 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDHAP31040 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.63■□□□□ 0.73
SDHAP31040 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.63■□□□□ 0.73
SDHAP31040 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 KRT16P3-201ENST00000439127 1283 ntBASIC19.63■□□□□ 0.73
SDHAP31040 AL499627.2-201ENST00000606283 725 ntBASIC19.63■□□□□ 0.73
SDHAP31040 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.63■□□□□ 0.73
SDHAP31040 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SDHAP31040 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.62■□□□□ 0.73
SDHAP31040 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.62■□□□□ 0.73
SDHAP31040 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms