Protein–RNA interactions for Protein: P28331

NDUFS1, NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1P28331 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFS1P28331 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFS1P28331 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NDUFS1P28331 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS1P28331 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFS1P28331 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFS1P28331 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS1P28331 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS1P28331 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS1P28331 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.33■■□□□ 1.01
NDUFS1P28331 DUSP8P5-201ENST00000422884 1815 ntBASIC21.33■■□□□ 1.01
NDUFS1P28331 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFS1P28331 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFS1P28331 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.32■■□□□ 1
NDUFS1P28331 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFS1P28331 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.32■■□□□ 1
NDUFS1P28331 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.32■■□□□ 1
NDUFS1P28331 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.32■■□□□ 1
NDUFS1P28331 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.32■■□□□ 1
NDUFS1P28331 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFS1P28331 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.32■■□□□ 1
NDUFS1P28331 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.32■■□□□ 1
NDUFS1P28331 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFS1P28331 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS1P28331 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.31■■□□□ 1
NDUFS1P28331 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS1P28331 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NDUFS1P28331 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS1P28331 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS1P28331 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.31■■□□□ 1
NDUFS1P28331 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
NDUFS1P28331 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.3■■□□□ 1
NDUFS1P28331 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
NDUFS1P28331 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.3■■□□□ 1
NDUFS1P28331 MIR572-201ENST00000384983 95 ntBASIC21.3■■□□□ 1
NDUFS1P28331 AC010141.3-201ENST00000456659 717 ntBASIC21.3■■□□□ 1
NDUFS1P28331 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.3■■□□□ 1
NDUFS1P28331 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS1P28331 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS1P28331 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.29■■□□□ 1
NDUFS1P28331 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.29■■□□□ 1
NDUFS1P28331 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS1P28331 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NDUFS1P28331 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.29■■□□□ 1
NDUFS1P28331 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.29■■□□□ 1
NDUFS1P28331 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.29■■□□□ 1
NDUFS1P28331 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.28■■□□□ 1
NDUFS1P28331 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.28■■□□□ 1
NDUFS1P28331 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.28■■□□□ 1
NDUFS1P28331 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.28■■□□□ 1
NDUFS1P28331 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS1P28331 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.28■■□□□ 1
NDUFS1P28331 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS1P28331 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.27■■□□□ 1
NDUFS1P28331 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS1P28331 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.27■■□□□ 1
NDUFS1P28331 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NDUFS1P28331 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS1P28331 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS1P28331 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS1P28331 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.27■■□□□ 1
NDUFS1P28331 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.27■■□□□ 1
NDUFS1P28331 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.27■■□□□ 1
NDUFS1P28331 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFS1P28331 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.27■■□□□ 1
NDUFS1P28331 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NDUFS1P28331 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NDUFS1P28331 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NDUFS1P28331 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.26■□□□□ 0.99
NDUFS1P28331 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFS1P28331 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFS1P28331 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
NDUFS1P28331 AL358852.1-201ENST00000623174 1268 ntBASIC21.26■□□□□ 0.99
NDUFS1P28331 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
NDUFS1P28331 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFS1P28331 LINC01960-201ENST00000563759 1884 ntBASIC21.26■□□□□ 0.99
NDUFS1P28331 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS1P28331 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS1P28331 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NDUFS1P28331 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS1P28331 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS1P28331 MIR935-201ENST00000401179 91 ntBASIC21.25■□□□□ 0.99
NDUFS1P28331 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFS1P28331 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.25■□□□□ 0.99
NDUFS1P28331 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFS1P28331 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS1P28331 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFS1P28331 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms