Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 LDB17YDL146W 1476 nt2.99□□□□□ -1.93
CDC39P25655 YML020WYML020W 1995 nt2.99□□□□□ -1.93
CDC39P25655 YDL124WYDL124W 939 nt2.98□□□□□ -1.93
CDC39P25655 PAU10YDR542W 363 nt2.98□□□□□ -1.93
CDC39P25655 PAU11YGL261C 363 nt2.98□□□□□ -1.93
CDC39P25655 PAU13YHL046C 363 nt2.98□□□□□ -1.93
CDC39P25655 ANB1YJR047C 474 nt2.98□□□□□ -1.93
CDC39P25655 YLR125WYLR125W 411 nt2.98□□□□□ -1.93
CDC39P25655 PAU4YLR461W 363 nt2.98□□□□□ -1.93
CDC39P25655 CDC9YDL164C 2268 nt2.98□□□□□ -1.93
CDC39P25655 AGE2YIL044C 897 nt2.98□□□□□ -1.93
CDC39P25655 RPS21AYKR057W 264 nt2.98□□□□□ -1.93
CDC39P25655 IRC25YLR021W 540 nt2.98□□□□□ -1.93
CDC39P25655 TEM1YML064C 738 nt2.98□□□□□ -1.93
CDC39P25655 SUI3YPL237W 858 nt2.98□□□□□ -1.93
CDC39P25655 SLD7YOR060C 774 nt2.97□□□□□ -1.93
CDC39P25655 RAD17YOR368W 1206 nt2.97□□□□□ -1.93
CDC39P25655 THR4YCR053W 1545 nt2.97□□□□□ -1.93
CDC39P25655 YOR022CYOR022C 2148 nt2.97□□□□□ -1.93
CDC39P25655 YML119WYML119W 1074 nt2.96□□□□□ -1.93
CDC39P25655 RSC1YGR056W 2787 nt2.96□□□□□ -1.94
CDC39P25655 IKS1YJL057C 2004 nt2.96□□□□□ -1.94
CDC39P25655 OSH3YHR073W 2991 nt2.96□□□□□ -1.94
CDC39P25655 SLA1YBL007C 3735 nt2.96□□□□□ -1.94
CDC39P25655 RIM4YHL024W 2142 nt2.96□□□□□ -1.94
CDC39P25655 YGL041W-AYGL041W-A 465 nt2.96□□□□□ -1.94
CDC39P25655 YHR180WYHR180W 492 nt2.96□□□□□ -1.94
CDC39P25655 GOT1YMR292W 417 nt2.96□□□□□ -1.94
CDC39P25655 TYW1YPL207W 2433 nt2.95□□□□□ -1.94
CDC39P25655 RPS8BYER102W 603 nt2.95□□□□□ -1.94
CDC39P25655 COG1YGL223C 1254 nt2.95□□□□□ -1.94
CDC39P25655 RPS8AYBL072C 603 nt2.95□□□□□ -1.94
CDC39P25655 FYV5YCL058C 459 nt2.95□□□□□ -1.94
CDC39P25655 MNT4YNR059W 1743 nt2.95□□□□□ -1.94
CDC39P25655 CIN8YEL061C 3003 nt2.95□□□□□ -1.94
CDC39P25655 REE1YJL217W 597 nt2.95□□□□□ -1.94
CDC39P25655 CYC1YJR048W 330 nt2.95□□□□□ -1.94
CDC39P25655 CBT1YKL208W 816 nt2.95□□□□□ -1.94
CDC39P25655 YOR073W-AYOR073W-A 234 nt2.95□□□□□ -1.94
CDC39P25655 PLP2YOR281C 861 nt2.95□□□□□ -1.94
CDC39P25655 SNT1YCR033W 3681 nt2.94□□□□□ -1.94
CDC39P25655 ERJ5YFR041C 888 nt2.94□□□□□ -1.94
CDC39P25655 TMA19YKL056C 504 nt2.94□□□□□ -1.94
CDC39P25655 YMR082CYMR082C 357 nt2.94□□□□□ -1.94
CDC39P25655 CUS2YNL286W 858 nt2.94□□□□□ -1.94
CDC39P25655 NAM2YLR382C 2685 nt2.94□□□□□ -1.94
CDC39P25655 NPL6YMR091C 1308 nt2.94□□□□□ -1.94
CDC39P25655 GRS2YPR081C 1857 nt2.93□□□□□ -1.94
CDC39P25655 MSR1YHR091C 1932 nt2.93□□□□□ -1.94
CDC39P25655 YGR269WYGR269W 327 nt2.93□□□□□ -1.94
CDC39P25655 ORC6YHR118C 1308 nt2.93□□□□□ -1.94
CDC39P25655 CDS1YBR029C 1374 nt2.93□□□□□ -1.94
CDC39P25655 VTC4YJL012C 2166 nt2.93□□□□□ -1.94
CDC39P25655 RRN7YJL025W 1545 nt2.92□□□□□ -1.94
CDC39P25655 YOL019WYOL019W 1656 nt2.92□□□□□ -1.94
CDC39P25655 LPP1YDR503C 825 nt2.92□□□□□ -1.94
CDC39P25655 AHP1YLR109W 531 nt2.92□□□□□ -1.94
CDC39P25655 SPS18YNL204C 903 nt2.92□□□□□ -1.94
CDC39P25655 RRP36YOR287C 903 nt2.92□□□□□ -1.94
CDC39P25655 YPL168WYPL168W 1293 nt2.92□□□□□ -1.94
CDC39P25655 TMN2YDR107C 2019 nt2.92□□□□□ -1.94
CDC39P25655 PRM7YDL039C 2097 nt2.92□□□□□ -1.94
CDC39P25655 RAD54YGL163C 2697 nt2.92□□□□□ -1.94
CDC39P25655 STV1YMR054W 2673 nt2.92□□□□□ -1.94
CDC39P25655 FAD1YDL045C 921 nt2.92□□□□□ -1.94
CDC39P25655 ATP5YDR298C 639 nt2.92□□□□□ -1.94
CDC39P25655 ALR2YFL050C 2577 nt2.91□□□□□ -1.94
CDC39P25655 BOI2YER114C 3123 nt2.91□□□□□ -1.94
CDC39P25655 ACT1YFL039C 1128 nt2.91□□□□□ -1.94
CDC39P25655 YGR107WYGR107W 450 nt2.91□□□□□ -1.94
CDC39P25655 YLR012CYLR012C 300 nt2.91□□□□□ -1.94
CDC39P25655 MAP1YLR244C 1164 nt2.91□□□□□ -1.94
CDC39P25655 TAF7YMR227C 1773 nt2.91□□□□□ -1.94
CDC39P25655 RAD2YGR258C 3096 nt2.91□□□□□ -1.94
CDC39P25655 PMT4YJR143C 2289 nt2.91□□□□□ -1.94
CDC39P25655 SEO1YAL067C 1782 nt2.9□□□□□ -1.94
CDC39P25655 PRP22YER013W 3438 nt2.9□□□□□ -1.94
CDC39P25655 IME4YGL192W 1803 nt2.9□□□□□ -1.95
CDC39P25655 SEG1YMR086W 2883 nt2.9□□□□□ -1.95
CDC39P25655 RNT1YMR239C 1416 nt2.9□□□□□ -1.95
CDC39P25655 GAS4YOL132W 1416 nt2.9□□□□□ -1.95
CDC39P25655 YEL057CYEL057C 702 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)DtK(UUU)D 73 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)G1tK(UUU)G1 73 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)G2tK(UUU)G2 73 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)KtK(UUU)K 73 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)LtK(UUU)L 73 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)OtK(UUU)O 73 nt2.9□□□□□ -1.95
CDC39P25655 tK(UUU)PtK(UUU)P 73 nt2.9□□□□□ -1.95
CDC39P25655 RPL30YGL030W 318 nt2.9□□□□□ -1.95
CDC39P25655 RAI1YGL246C 1164 nt2.9□□□□□ -1.95
CDC39P25655 ROT1YMR200W 771 nt2.9□□□□□ -1.95
CDC39P25655 PSF3YOL146W 585 nt2.9□□□□□ -1.95
CDC39P25655 CDC6YJL194W 1542 nt2.89□□□□□ -1.95
CDC39P25655 SDO1YLR022C 753 nt2.89□□□□□ -1.95
CDC39P25655 RPL15AYLR029C 615 nt2.89□□□□□ -1.95
CDC39P25655 RNH203YLR154C 333 nt2.89□□□□□ -1.95
CDC39P25655 ATG8YBL078C 354 nt2.89□□□□□ -1.95
CDC39P25655 WRS1YOL097C 1299 nt2.89□□□□□ -1.95
CDC39P25655 URA2YJL130C 6645 nt2.89□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms