Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 AC080038.3-201ENST00000623346 1952 ntBASIC23.2■■□□□ 1.3
MMP8P22894 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
MMP8P22894 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
MMP8P22894 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
MMP8P22894 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP8P22894 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.19■■□□□ 1.3
MMP8P22894 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
MMP8P22894 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.19■■□□□ 1.3
MMP8P22894 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.19■■□□□ 1.3
MMP8P22894 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
MMP8P22894 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP8P22894 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MMP8P22894 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MMP8P22894 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MMP8P22894 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.18■■□□□ 1.3
MMP8P22894 LINC00526-201ENST00000581067 1875 ntBASIC23.18■■□□□ 1.3
MMP8P22894 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MMP8P22894 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
MMP8P22894 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.18■■□□□ 1.3
MMP8P22894 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.18■■□□□ 1.3
MMP8P22894 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
MMP8P22894 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
MMP8P22894 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MMP8P22894 CA15P2-201ENST00000611168 834 ntBASIC23.17■■□□□ 1.3
MMP8P22894 AC139530.1-201ENST00000575312 1977 ntBASIC23.17■■□□□ 1.3
MMP8P22894 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.17■■□□□ 1.3
MMP8P22894 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MMP8P22894 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.16■■□□□ 1.3
MMP8P22894 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP8P22894 SERBP1P1-201ENST00000396021 1160 ntBASIC23.16■■□□□ 1.3
MMP8P22894 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.16■■□□□ 1.3
MMP8P22894 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP8P22894 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.16■■□□□ 1.3
MMP8P22894 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.16■■□□□ 1.3
MMP8P22894 DUX4L19-201ENST00000557448 1267 ntBASIC23.16■■□□□ 1.3
MMP8P22894 AL138724.1-201ENST00000606771 1088 ntBASIC23.16■■□□□ 1.3
MMP8P22894 AC131212.1-201ENST00000613771 668 ntBASIC23.16■■□□□ 1.3
MMP8P22894 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
MMP8P22894 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.16■■□□□ 1.3
MMP8P22894 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
MMP8P22894 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP8P22894 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MMP8P22894 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MMP8P22894 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP8P22894 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
MMP8P22894 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP8P22894 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MMP8P22894 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP8P22894 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP8P22894 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MMP8P22894 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.15■■□□□ 1.3
MMP8P22894 AL031602.1-201ENST00000633169 911 ntBASIC23.15■■□□□ 1.3
MMP8P22894 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.15■■□□□ 1.3
MMP8P22894 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MMP8P22894 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.15■■□□□ 1.3
MMP8P22894 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP8P22894 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP8P22894 AC137767.1-201ENST00000602918 1920 ntBASIC23.15■■□□□ 1.3
MMP8P22894 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
MMP8P22894 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
MMP8P22894 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
MMP8P22894 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MMP8P22894 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
MMP8P22894 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
MMP8P22894 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
MMP8P22894 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
MMP8P22894 SYT6-210ENST00000641643 1587 ntBASIC23.14■■□□□ 1.3
MMP8P22894 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
MMP8P22894 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
MMP8P22894 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.14■■□□□ 1.3
MMP8P22894 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MMP8P22894 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP8P22894 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP8P22894 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
MMP8P22894 AL136116.3-201ENST00000402907 1138 ntBASIC23.14■■□□□ 1.29
MMP8P22894 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
MMP8P22894 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.14■■□□□ 1.29
MMP8P22894 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP8P22894 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP8P22894 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP8P22894 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP8P22894 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MMP8P22894 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP8P22894 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MMP8P22894 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP8P22894 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms