Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DOBP13765 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HLA-DOBP13765 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.71■□□□□ 0.75
HLA-DOBP13765 EP400NL-214ENST00000641289 2402 ntBASIC19.71■□□□□ 0.75
HLA-DOBP13765 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DOBP13765 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DOBP13765 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HLA-DOBP13765 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HLA-DOBP13765 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DOBP13765 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DOBP13765 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DOBP13765 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DOBP13765 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DOBP13765 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DOBP13765 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HLA-DOBP13765 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-DOBP13765 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 ESRRAP2-201ENST00000418437 1549 ntBASIC19.69■□□□□ 0.74
HLA-DOBP13765 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HLA-DOBP13765 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DOBP13765 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DOBP13765 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DOBP13765 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HLA-DOBP13765 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DOBP13765 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 AC133637.1-201ENST00000624115 1537 ntBASIC19.68■□□□□ 0.74
HLA-DOBP13765 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DOBP13765 MIR3181-201ENST00000578512 73 ntBASIC19.68■□□□□ 0.74
HLA-DOBP13765 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DOBP13765 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DOBP13765 LINC01960-201ENST00000563759 1884 ntBASIC19.67■□□□□ 0.74
HLA-DOBP13765 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DOBP13765 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DOBP13765 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DOBP13765 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DOBP13765 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DOBP13765 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DOBP13765 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DOBP13765 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DOBP13765 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DOBP13765 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DOBP13765 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DOBP13765 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DOBP13765 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DOBP13765 AC127496.7-201ENST00000625110 1798 ntBASIC19.65■□□□□ 0.74
HLA-DOBP13765 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DOBP13765 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DOBP13765 AL136116.3-201ENST00000402907 1138 ntBASIC19.65■□□□□ 0.74
HLA-DOBP13765 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DOBP13765 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DOBP13765 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DOBP13765 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DOBP13765 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DOBP13765 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DOBP13765 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DOBP13765 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.64■□□□□ 0.74
HLA-DOBP13765 AC080038.3-201ENST00000623346 1952 ntBASIC19.64■□□□□ 0.74
HLA-DOBP13765 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DOBP13765 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DOBP13765 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
HLA-DOBP13765 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
HLA-DOBP13765 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HLA-DOBP13765 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DOBP13765 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.64■□□□□ 0.73
HLA-DOBP13765 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DOBP13765 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DOBP13765 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DOBP13765 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DOBP13765 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DOBP13765 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DOBP13765 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DOBP13765 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DOBP13765 SERBP1P1-201ENST00000396021 1160 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms