Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSN3P07498 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSN3P07498 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSN3P07498 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CSN3P07498 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CSN3P07498 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.14■□□□□ 0.33
CSN3P07498 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.14■□□□□ 0.33
CSN3P07498 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.14■□□□□ 0.33
CSN3P07498 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.14■□□□□ 0.33
CSN3P07498 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.14■□□□□ 0.33
CSN3P07498 C17orf82-201ENST00000623772 1530 ntBASIC17.14■□□□□ 0.33
CSN3P07498 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.14■□□□□ 0.33
CSN3P07498 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSN3P07498 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.13■□□□□ 0.33
CSN3P07498 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CSN3P07498 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.13■□□□□ 0.33
CSN3P07498 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSN3P07498 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.13■□□□□ 0.33
CSN3P07498 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CSN3P07498 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSN3P07498 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CSN3P07498 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.12■□□□□ 0.33
CSN3P07498 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.12■□□□□ 0.33
CSN3P07498 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.12■□□□□ 0.33
CSN3P07498 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.12■□□□□ 0.33
CSN3P07498 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.12■□□□□ 0.33
CSN3P07498 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.12■□□□□ 0.33
CSN3P07498 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CSN3P07498 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSN3P07498 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.12■□□□□ 0.33
CSN3P07498 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CSN3P07498 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.12■□□□□ 0.33
CSN3P07498 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.11■□□□□ 0.33
CSN3P07498 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.11■□□□□ 0.33
CSN3P07498 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSN3P07498 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSN3P07498 AC233723.2-201ENST00000623798 2106 ntBASIC17.11■□□□□ 0.33
CSN3P07498 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSN3P07498 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSN3P07498 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSN3P07498 AC096631.2-201ENST00000436136 790 ntBASIC17.11■□□□□ 0.33
CSN3P07498 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.11■□□□□ 0.33
CSN3P07498 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.11■□□□□ 0.33
CSN3P07498 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSN3P07498 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.1■□□□□ 0.33
CSN3P07498 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
CSN3P07498 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.1■□□□□ 0.33
CSN3P07498 AC099791.2-201ENST00000605725 427 ntBASIC17.1■□□□□ 0.33
CSN3P07498 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSN3P07498 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.1■□□□□ 0.33
CSN3P07498 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSN3P07498 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSN3P07498 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSN3P07498 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSN3P07498 AL139246.5-201ENST00000606645 996 ntBASIC17.09■□□□□ 0.33
CSN3P07498 AC092171.4-201ENST00000609130 632 ntBASIC17.09■□□□□ 0.33
CSN3P07498 AC241377.3-202ENST00000626088 1088 ntBASIC17.09■□□□□ 0.33
CSN3P07498 AC241585.3-202ENST00000628937 1088 ntBASIC17.09■□□□□ 0.33
CSN3P07498 AC245100.8-202ENST00000629247 1058 ntBASIC17.09■□□□□ 0.33
CSN3P07498 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSN3P07498 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSN3P07498 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms