Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGK1P00558 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PGK1P00558 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGK1P00558 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
PGK1P00558 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.7■■□□□ 1.54
PGK1P00558 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PGK1P00558 KRT19P1-201ENST00000405746 1186 ntBASIC24.7■■□□□ 1.54
PGK1P00558 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PGK1P00558 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.7■■□□□ 1.54
PGK1P00558 AL109923.1-201ENST00000618799 583 ntBASIC24.7■■□□□ 1.54
PGK1P00558 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PGK1P00558 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.7■■□□□ 1.54
PGK1P00558 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PGK1P00558 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.7■■□□□ 1.54
PGK1P00558 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.7■■□□□ 1.54
PGK1P00558 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PGK1P00558 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PGK1P00558 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PGK1P00558 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PGK1P00558 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PGK1P00558 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PGK1P00558 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PGK1P00558 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
PGK1P00558 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PGK1P00558 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.68■■□□□ 1.54
PGK1P00558 ABHD17AP1-201ENST00000358206 933 ntBASIC24.68■■□□□ 1.54
PGK1P00558 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PGK1P00558 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.68■■□□□ 1.54
PGK1P00558 SMUG1P1-201ENST00000590640 811 ntBASIC24.68■■□□□ 1.54
PGK1P00558 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PGK1P00558 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PGK1P00558 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PGK1P00558 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.68■■□□□ 1.54
PGK1P00558 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.67■■□□□ 1.54
PGK1P00558 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.67■■□□□ 1.54
PGK1P00558 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
PGK1P00558 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PGK1P00558 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PGK1P00558 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.66■■□□□ 1.54
PGK1P00558 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PGK1P00558 AC011767.1-201ENST00000617410 1153 ntBASIC24.66■■□□□ 1.54
PGK1P00558 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.66■■□□□ 1.54
PGK1P00558 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PGK1P00558 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PGK1P00558 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PGK1P00558 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.66■■□□□ 1.54
PGK1P00558 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.66■■□□□ 1.54
PGK1P00558 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PGK1P00558 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PGK1P00558 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PGK1P00558 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PGK1P00558 NCF1B-203ENST00000435988 1254 ntBASIC24.65■■□□□ 1.54
PGK1P00558 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.65■■□□□ 1.54
PGK1P00558 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.65■■□□□ 1.54
PGK1P00558 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.65■■□□□ 1.54
PGK1P00558 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PGK1P00558 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGK1P00558 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PGK1P00558 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PGK1P00558 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PGK1P00558 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.64■■□□□ 1.54
PGK1P00558 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.64■■□□□ 1.54
PGK1P00558 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.64■■□□□ 1.54
PGK1P00558 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.64■■□□□ 1.54
PGK1P00558 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.64■■□□□ 1.54
PGK1P00558 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PGK1P00558 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PGK1P00558 AC079630.1-202ENST00000618127 1840 ntBASIC24.63■■□□□ 1.53
PGK1P00558 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PGK1P00558 AC142381.3-201ENST00000568208 1670 ntBASIC24.63■■□□□ 1.53
PGK1P00558 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
PGK1P00558 MIR663A-201ENST00000385250 93 ntBASIC24.63■■□□□ 1.53
PGK1P00558 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.63■■□□□ 1.53
PGK1P00558 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.63■■□□□ 1.53
PGK1P00558 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.63■■□□□ 1.53
PGK1P00558 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.63■■□□□ 1.53
PGK1P00558 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.63■■□□□ 1.53
PGK1P00558 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PGK1P00558 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PGK1P00558 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGK1P00558 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms