Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SOX30O94993 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SOX30O94993 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SOX30O94993 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.41■□□□□ 0.86
SOX30O94993 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX30O94993 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.41■□□□□ 0.86
SOX30O94993 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX30O94993 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX30O94993 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.41■□□□□ 0.86
SOX30O94993 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 AC004687.1-201ENST00000579003 1625 ntBASIC20.41■□□□□ 0.86
SOX30O94993 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SOX30O94993 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOX30O94993 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
SOX30O94993 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX30O94993 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX30O94993 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX30O94993 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX30O94993 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX30O94993 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SOX30O94993 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SOX30O94993 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX30O94993 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX30O94993 LINC01960-201ENST00000563759 1884 ntBASIC20.4■□□□□ 0.86
SOX30O94993 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX30O94993 AC133637.1-201ENST00000624115 1537 ntBASIC20.4■□□□□ 0.86
SOX30O94993 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX30O94993 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX30O94993 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX30O94993 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX30O94993 ECEL1P1-201ENST00000373592 1742 ntBASIC20.39■□□□□ 0.86
SOX30O94993 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX30O94993 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SOX30O94993 pRNA.6-201ENST00000610482 90 ntBASIC20.39■□□□□ 0.85
SOX30O94993 pRNA.5-201ENST00000612139 90 ntBASIC20.39■□□□□ 0.85
SOX30O94993 pRNA.11-201ENST00000618423 90 ntBASIC20.39■□□□□ 0.85
SOX30O94993 pRNA.13-201ENST00000619112 90 ntBASIC20.39■□□□□ 0.85
SOX30O94993 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX30O94993 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX30O94993 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX30O94993 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX30O94993 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX30O94993 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX30O94993 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX30O94993 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.38■□□□□ 0.85
SOX30O94993 CA15P2-201ENST00000611168 834 ntBASIC20.38■□□□□ 0.85
SOX30O94993 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SOX30O94993 AC087742.1-201ENST00000575880 1738 ntBASIC20.38■□□□□ 0.85
SOX30O94993 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX30O94993 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 GUSBP5-202ENST00000510805 1989 ntBASIC20.37■□□□□ 0.85
SOX30O94993 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX30O94993 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX30O94993 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SOX30O94993 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.37■□□□□ 0.85
SOX30O94993 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX30O94993 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.37■□□□□ 0.85
SOX30O94993 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SOX30O94993 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SOX30O94993 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SOX30O94993 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX30O94993 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX30O94993 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.36■□□□□ 0.85
SOX30O94993 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX30O94993 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX30O94993 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.36■□□□□ 0.85
SOX30O94993 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX30O94993 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX30O94993 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX30O94993 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX30O94993 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.36■□□□□ 0.85
SOX30O94993 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX30O94993 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX30O94993 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX30O94993 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX30O94993 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms