Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC01124-201ENST00000409786 2117 ntBASIC29.62■■■□□ 2.33
LTN1O94822 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.62■■■□□ 2.33
LTN1O94822 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.62■■■□□ 2.33
LTN1O94822 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.62■■■□□ 2.33
LTN1O94822 AC068587.7-201ENST00000641602 218 ntBASIC29.62■■■□□ 2.33
LTN1O94822 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LTN1O94822 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LTN1O94822 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LTN1O94822 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
LTN1O94822 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LTN1O94822 SMUG1P1-201ENST00000590640 811 ntBASIC29.61■■■□□ 2.33
LTN1O94822 AC004812.2-201ENST00000611079 2094 ntBASIC29.61■■■□□ 2.33
LTN1O94822 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.6■■■□□ 2.33
LTN1O94822 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.6■■■□□ 2.33
LTN1O94822 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.6■■■□□ 2.33
LTN1O94822 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC29.6■■■□□ 2.33
LTN1O94822 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LTN1O94822 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.6■■■□□ 2.33
LTN1O94822 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
LTN1O94822 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LTN1O94822 BX005040.4-201ENST00000637145 1518 ntBASIC29.59■■■□□ 2.33
LTN1O94822 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
LTN1O94822 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC29.59■■■□□ 2.33
LTN1O94822 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC29.59■■■□□ 2.33
LTN1O94822 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC29.59■■■□□ 2.33
LTN1O94822 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC29.59■■■□□ 2.33
LTN1O94822 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
LTN1O94822 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.58■■■□□ 2.33
LTN1O94822 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.58■■■□□ 2.33
LTN1O94822 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.58■■■□□ 2.33
LTN1O94822 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.58■■■□□ 2.33
LTN1O94822 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LTN1O94822 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
LTN1O94822 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
LTN1O94822 MIR663A-201ENST00000385250 93 ntBASIC29.57■■■□□ 2.32
LTN1O94822 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.57■■■□□ 2.32
LTN1O94822 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.57■■■□□ 2.32
LTN1O94822 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LTN1O94822 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
LTN1O94822 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
LTN1O94822 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LTN1O94822 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LTN1O94822 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.56■■■□□ 2.32
LTN1O94822 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LTN1O94822 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
LTN1O94822 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
LTN1O94822 CDCA4P2-201ENST00000441182 718 ntBASIC29.56■■■□□ 2.32
LTN1O94822 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LTN1O94822 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.56■■■□□ 2.32
LTN1O94822 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC29.56■■■□□ 2.32
LTN1O94822 ABCB10P4-201ENST00000566803 2184 ntBASIC29.56■■■□□ 2.32
LTN1O94822 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LTN1O94822 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LTN1O94822 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC29.55■■■□□ 2.32
LTN1O94822 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LTN1O94822 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC29.55■■■□□ 2.32
LTN1O94822 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LTN1O94822 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC29.55■■■□□ 2.32
LTN1O94822 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LTN1O94822 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
LTN1O94822 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
LTN1O94822 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LTN1O94822 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LTN1O94822 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC29.54■■■□□ 2.32
LTN1O94822 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LTN1O94822 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
LTN1O94822 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LTN1O94822 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.53■■■□□ 2.32
LTN1O94822 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LTN1O94822 GAS2L1P2-201ENST00000436355 1356 ntBASIC29.53■■■□□ 2.32
LTN1O94822 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
LTN1O94822 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC29.52■■■□□ 2.32
LTN1O94822 AC080038.1-201ENST00000611274 1154 ntBASIC29.52■■■□□ 2.32
LTN1O94822 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LTN1O94822 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
LTN1O94822 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LTN1O94822 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LTN1O94822 AC026185.1-201ENST00000445748 174 ntBASIC29.52■■■□□ 2.32
LTN1O94822 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC29.52■■■□□ 2.32
LTN1O94822 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
LTN1O94822 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC29.51■■■□□ 2.31
LTN1O94822 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.51■■■□□ 2.31
LTN1O94822 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC29.51■■■□□ 2.31
LTN1O94822 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.51■■■□□ 2.31
LTN1O94822 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
LTN1O94822 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
LTN1O94822 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29.5■■■□□ 2.31
LTN1O94822 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LTN1O94822 AC010141.3-201ENST00000456659 717 ntBASIC29.5■■■□□ 2.31
LTN1O94822 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC29.5■■■□□ 2.31
LTN1O94822 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC29.5■■■□□ 2.31
LTN1O94822 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms