Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NPHS1O60500 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPHS1O60500 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.47■■□□□ 1.03
NPHS1O60500 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPHS1O60500 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPHS1O60500 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPHS1O60500 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPHS1O60500 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NPHS1O60500 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPHS1O60500 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NPHS1O60500 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.46■■□□□ 1.03
NPHS1O60500 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.46■■□□□ 1.03
NPHS1O60500 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.46■■□□□ 1.03
NPHS1O60500 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPHS1O60500 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.46■■□□□ 1.03
NPHS1O60500 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.45■■□□□ 1.02
NPHS1O60500 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NPHS1O60500 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NPHS1O60500 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NPHS1O60500 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.45■■□□□ 1.02
NPHS1O60500 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.45■■□□□ 1.02
NPHS1O60500 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.45■■□□□ 1.02
NPHS1O60500 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NPHS1O60500 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.45■■□□□ 1.02
NPHS1O60500 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPHS1O60500 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.45■■□□□ 1.02
NPHS1O60500 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.45■■□□□ 1.02
NPHS1O60500 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.45■■□□□ 1.02
NPHS1O60500 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.45■■□□□ 1.02
NPHS1O60500 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPHS1O60500 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NPHS1O60500 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.45■■□□□ 1.02
NPHS1O60500 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NPHS1O60500 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPHS1O60500 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NPHS1O60500 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPHS1O60500 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.44■■□□□ 1.02
NPHS1O60500 AL137060.1-201ENST00000618151 2648 ntBASIC21.43■■□□□ 1.02
NPHS1O60500 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.43■■□□□ 1.02
NPHS1O60500 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.43■■□□□ 1.02
NPHS1O60500 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.43■■□□□ 1.02
NPHS1O60500 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.43■■□□□ 1.02
NPHS1O60500 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPHS1O60500 AC010542.4-201ENST00000563151 1910 ntBASIC21.43■■□□□ 1.02
NPHS1O60500 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NPHS1O60500 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPHS1O60500 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPHS1O60500 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPHS1O60500 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.42■■□□□ 1.02
NPHS1O60500 CA15P2-201ENST00000611168 834 ntBASIC21.42■■□□□ 1.02
NPHS1O60500 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NPHS1O60500 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NPHS1O60500 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NPHS1O60500 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.42■■□□□ 1.02
NPHS1O60500 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.41■■□□□ 1.02
NPHS1O60500 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.41■■□□□ 1.02
NPHS1O60500 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.41■■□□□ 1.02
NPHS1O60500 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NPHS1O60500 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NPHS1O60500 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPHS1O60500 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPHS1O60500 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.4■■□□□ 1.02
NPHS1O60500 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.4■■□□□ 1.02
NPHS1O60500 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.4■■□□□ 1.02
NPHS1O60500 BX664725.1-201ENST00000438252 379 ntBASIC21.4■■□□□ 1.02
NPHS1O60500 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.4■■□□□ 1.02
NPHS1O60500 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NPHS1O60500 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NPHS1O60500 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.4■■□□□ 1.02
NPHS1O60500 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.4■■□□□ 1.02
NPHS1O60500 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.4■■□□□ 1.02
NPHS1O60500 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.39■■□□□ 1.02
NPHS1O60500 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPHS1O60500 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPHS1O60500 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPHS1O60500 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.39■■□□□ 1.02
NPHS1O60500 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.39■■□□□ 1.01
NPHS1O60500 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.39■■□□□ 1.01
NPHS1O60500 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPHS1O60500 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPHS1O60500 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPHS1O60500 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPHS1O60500 FAM99A-202ENST00000538190 1989 ntBASIC21.39■■□□□ 1.01
NPHS1O60500 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPHS1O60500 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.38■■□□□ 1.01
NPHS1O60500 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPHS1O60500 AC004687.1-201ENST00000579003 1625 ntBASIC21.38■■□□□ 1.01
NPHS1O60500 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms