Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ZIC3O60481 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.86■□□□□ 0.77
ZIC3O60481 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.86■□□□□ 0.77
ZIC3O60481 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.86■□□□□ 0.77
ZIC3O60481 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.86■□□□□ 0.77
ZIC3O60481 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZIC3O60481 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.85■□□□□ 0.77
ZIC3O60481 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZIC3O60481 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZIC3O60481 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZIC3O60481 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.85■□□□□ 0.77
ZIC3O60481 AC068587.7-201ENST00000641602 218 ntBASIC19.85■□□□□ 0.77
ZIC3O60481 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZIC3O60481 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZIC3O60481 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZIC3O60481 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ZIC3O60481 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
ZIC3O60481 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZIC3O60481 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
ZIC3O60481 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZIC3O60481 IRS3P-201ENST00000223076 1006 ntBASIC19.84■□□□□ 0.77
ZIC3O60481 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.84■□□□□ 0.77
ZIC3O60481 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
ZIC3O60481 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZIC3O60481 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.84■□□□□ 0.77
ZIC3O60481 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
ZIC3O60481 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
ZIC3O60481 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.84■□□□□ 0.77
ZIC3O60481 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.84■□□□□ 0.77
ZIC3O60481 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZIC3O60481 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZIC3O60481 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.83■□□□□ 0.77
ZIC3O60481 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZIC3O60481 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.83■□□□□ 0.77
ZIC3O60481 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZIC3O60481 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZIC3O60481 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZIC3O60481 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
ZIC3O60481 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZIC3O60481 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
ZIC3O60481 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.83■□□□□ 0.76
ZIC3O60481 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ZIC3O60481 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ZIC3O60481 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.82■□□□□ 0.76
ZIC3O60481 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.82■□□□□ 0.76
ZIC3O60481 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZIC3O60481 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZIC3O60481 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZIC3O60481 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.82■□□□□ 0.76
ZIC3O60481 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.82■□□□□ 0.76
ZIC3O60481 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZIC3O60481 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
ZIC3O60481 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
ZIC3O60481 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
ZIC3O60481 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.81■□□□□ 0.76
ZIC3O60481 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZIC3O60481 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.8■□□□□ 0.76
ZIC3O60481 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZIC3O60481 LINC01960-201ENST00000563759 1884 ntBASIC19.8■□□□□ 0.76
ZIC3O60481 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZIC3O60481 MIR572-201ENST00000384983 95 ntBASIC19.8■□□□□ 0.76
ZIC3O60481 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.8■□□□□ 0.76
ZIC3O60481 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.8■□□□□ 0.76
ZIC3O60481 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.8■□□□□ 0.76
ZIC3O60481 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.8■□□□□ 0.76
ZIC3O60481 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.8■□□□□ 0.76
ZIC3O60481 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.8■□□□□ 0.76
ZIC3O60481 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZIC3O60481 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZIC3O60481 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZIC3O60481 C9orf163-202ENST00000624034 2573 ntBASIC19.8■□□□□ 0.76
ZIC3O60481 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZIC3O60481 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.8■□□□□ 0.76
ZIC3O60481 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZIC3O60481 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ZIC3O60481 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
ZIC3O60481 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZIC3O60481 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ZIC3O60481 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms