Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.81■□□□□ 0.92
URB1O60287 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
URB1O60287 POU5F1P3-201ENST00000428824 1078 ntBASIC20.81■□□□□ 0.92
URB1O60287 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
URB1O60287 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
URB1O60287 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.81■□□□□ 0.92
URB1O60287 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.8■□□□□ 0.92
URB1O60287 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.8■□□□□ 0.92
URB1O60287 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.8■□□□□ 0.92
URB1O60287 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.8■□□□□ 0.92
URB1O60287 PRORSD1P-201ENST00000295112 541 ntBASIC20.8■□□□□ 0.92
URB1O60287 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.8■□□□□ 0.92
URB1O60287 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.8■□□□□ 0.92
URB1O60287 FP325331.1-202ENST00000623531 1380 ntBASIC20.8■□□□□ 0.92
URB1O60287 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
URB1O60287 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
URB1O60287 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
URB1O60287 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
URB1O60287 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.79■□□□□ 0.92
URB1O60287 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
URB1O60287 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
URB1O60287 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
URB1O60287 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
URB1O60287 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.79■□□□□ 0.92
URB1O60287 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.79■□□□□ 0.92
URB1O60287 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
URB1O60287 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.78■□□□□ 0.92
URB1O60287 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
URB1O60287 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
URB1O60287 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
URB1O60287 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.78■□□□□ 0.92
URB1O60287 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.78■□□□□ 0.92
URB1O60287 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.77■□□□□ 0.92
URB1O60287 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.77■□□□□ 0.92
URB1O60287 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
URB1O60287 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
URB1O60287 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
URB1O60287 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.77■□□□□ 0.92
URB1O60287 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
URB1O60287 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
URB1O60287 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
URB1O60287 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
URB1O60287 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
URB1O60287 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.76■□□□□ 0.91
URB1O60287 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
URB1O60287 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
URB1O60287 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
URB1O60287 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.76■□□□□ 0.91
URB1O60287 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
URB1O60287 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
URB1O60287 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
URB1O60287 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
URB1O60287 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
URB1O60287 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 ALDH1A3-203ENST00000557963 1670 ntBASIC20.75■□□□□ 0.91
URB1O60287 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.75■□□□□ 0.91
URB1O60287 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.75■□□□□ 0.91
URB1O60287 AC231657.2-201ENST00000624556 255 ntBASIC20.75■□□□□ 0.91
URB1O60287 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.75■□□□□ 0.91
URB1O60287 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.75■□□□□ 0.91
URB1O60287 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
URB1O60287 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
URB1O60287 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.75■□□□□ 0.91
URB1O60287 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.75■□□□□ 0.91
URB1O60287 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.75■□□□□ 0.91
URB1O60287 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
URB1O60287 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.75■□□□□ 0.91
URB1O60287 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
URB1O60287 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.74■□□□□ 0.91
URB1O60287 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
URB1O60287 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
URB1O60287 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
URB1O60287 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.74■□□□□ 0.91
URB1O60287 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
URB1O60287 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.74■□□□□ 0.91
URB1O60287 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
URB1O60287 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.74■□□□□ 0.91
URB1O60287 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms