Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNAI2O43623 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNAI2O43623 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.34■□□□□ 0.21
SNAI2O43623 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.34■□□□□ 0.21
SNAI2O43623 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SNAI2O43623 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNAI2O43623 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.34■□□□□ 0.21
SNAI2O43623 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.34■□□□□ 0.21
SNAI2O43623 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.34■□□□□ 0.21
SNAI2O43623 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.34■□□□□ 0.21
SNAI2O43623 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.34■□□□□ 0.21
SNAI2O43623 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.34■□□□□ 0.21
SNAI2O43623 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNAI2O43623 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNAI2O43623 AC092667.1-201ENST00000434301 2586 ntBASIC16.33■□□□□ 0.21
SNAI2O43623 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SNAI2O43623 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SNAI2O43623 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SNAI2O43623 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.33■□□□□ 0.2
SNAI2O43623 AC022616.5-201ENST00000518796 181 ntBASIC16.33■□□□□ 0.2
SNAI2O43623 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
SNAI2O43623 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.33■□□□□ 0.2
SNAI2O43623 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 C11orf96-202ENST00000528572 1834 ntBASIC16.33■□□□□ 0.2
SNAI2O43623 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SNAI2O43623 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNAI2O43623 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.32■□□□□ 0.2
SNAI2O43623 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SNAI2O43623 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.32■□□□□ 0.2
SNAI2O43623 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SNAI2O43623 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNAI2O43623 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SNAI2O43623 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNAI2O43623 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.31■□□□□ 0.2
SNAI2O43623 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNAI2O43623 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SNAI2O43623 AL391422.3-201ENST00000603791 2761 ntBASIC16.31■□□□□ 0.2
SNAI2O43623 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.31■□□□□ 0.2
SNAI2O43623 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.31■□□□□ 0.2
SNAI2O43623 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.31■□□□□ 0.2
SNAI2O43623 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.31■□□□□ 0.2
SNAI2O43623 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SNAI2O43623 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNAI2O43623 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNAI2O43623 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
SNAI2O43623 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.31■□□□□ 0.2
SNAI2O43623 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.31■□□□□ 0.2
SNAI2O43623 AL353803.4-201ENST00000565882 1934 ntBASIC16.31■□□□□ 0.2
SNAI2O43623 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SNAI2O43623 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNAI2O43623 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.3■□□□□ 0.2
SNAI2O43623 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SNAI2O43623 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNAI2O43623 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SNAI2O43623 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.3■□□□□ 0.2
SNAI2O43623 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SNAI2O43623 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.3■□□□□ 0.2
SNAI2O43623 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SNAI2O43623 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.3■□□□□ 0.2
SNAI2O43623 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNAI2O43623 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.29■□□□□ 0.2
SNAI2O43623 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.29■□□□□ 0.2
SNAI2O43623 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 AC019171.1-201ENST00000601251 1056 ntBASIC16.29■□□□□ 0.2
SNAI2O43623 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.29■□□□□ 0.2
SNAI2O43623 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.29■□□□□ 0.2
SNAI2O43623 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNAI2O43623 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.29■□□□□ 0.2
SNAI2O43623 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SNAI2O43623 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNAI2O43623 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms