Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.48■□□□□ 0.87
NKX2-8O15522 KRT19P1-201ENST00000405746 1186 ntBASIC20.48■□□□□ 0.87
NKX2-8O15522 CROCCP5-201ENST00000436658 830 ntBASIC20.48■□□□□ 0.87
NKX2-8O15522 AC006970.2-201ENST00000450065 779 ntBASIC20.48■□□□□ 0.87
NKX2-8O15522 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-8O15522 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-8O15522 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.48■□□□□ 0.87
NKX2-8O15522 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.48■□□□□ 0.87
NKX2-8O15522 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-8O15522 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NKX2-8O15522 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-8O15522 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.47■□□□□ 0.87
NKX2-8O15522 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX2-8O15522 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NKX2-8O15522 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.47■□□□□ 0.87
NKX2-8O15522 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX2-8O15522 SMUG1P1-201ENST00000590640 811 ntBASIC20.47■□□□□ 0.87
NKX2-8O15522 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-8O15522 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX2-8O15522 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NKX2-8O15522 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.46■□□□□ 0.87
NKX2-8O15522 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NKX2-8O15522 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.46■□□□□ 0.87
NKX2-8O15522 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.46■□□□□ 0.87
NKX2-8O15522 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.46■□□□□ 0.87
NKX2-8O15522 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.46■□□□□ 0.87
NKX2-8O15522 AC068587.7-201ENST00000641602 218 ntBASIC20.46■□□□□ 0.87
NKX2-8O15522 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NKX2-8O15522 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX2-8O15522 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX2-8O15522 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX2-8O15522 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.46■□□□□ 0.87
NKX2-8O15522 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NKX2-8O15522 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NKX2-8O15522 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.45■□□□□ 0.86
NKX2-8O15522 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.45■□□□□ 0.86
NKX2-8O15522 AL109923.1-201ENST00000618799 583 ntBASIC20.45■□□□□ 0.86
NKX2-8O15522 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 AC079630.1-202ENST00000618127 1840 ntBASIC20.45■□□□□ 0.86
NKX2-8O15522 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.45■□□□□ 0.86
NKX2-8O15522 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-8O15522 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-8O15522 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-8O15522 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-8O15522 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-8O15522 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NKX2-8O15522 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
NKX2-8O15522 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-8O15522 AL355802.2-201ENST00000402069 882 ntBASIC20.44■□□□□ 0.86
NKX2-8O15522 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-8O15522 AC011767.1-201ENST00000617410 1153 ntBASIC20.44■□□□□ 0.86
NKX2-8O15522 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-8O15522 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-8O15522 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.44■□□□□ 0.86
NKX2-8O15522 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-8O15522 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX2-8O15522 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-8O15522 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NKX2-8O15522 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-8O15522 AC010141.3-201ENST00000456659 717 ntBASIC20.43■□□□□ 0.86
NKX2-8O15522 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-8O15522 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.43■□□□□ 0.86
NKX2-8O15522 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-8O15522 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-8O15522 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX2-8O15522 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-8O15522 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-8O15522 ESRRAP2-201ENST00000418437 1549 ntBASIC20.43■□□□□ 0.86
NKX2-8O15522 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NKX2-8O15522 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.42■□□□□ 0.86
NKX2-8O15522 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.42■□□□□ 0.86
NKX2-8O15522 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.42■□□□□ 0.86
NKX2-8O15522 AC087239.1-201ENST00000622671 572 ntBASIC20.42■□□□□ 0.86
NKX2-8O15522 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-8O15522 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.42■□□□□ 0.86
NKX2-8O15522 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-8O15522 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-8O15522 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms