Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.65■□□□□ 0.58
SHOXO15266 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.65■□□□□ 0.58
SHOXO15266 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SHOXO15266 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHOXO15266 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.64■□□□□ 0.58
SHOXO15266 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHOXO15266 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHOXO15266 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.64■□□□□ 0.57
SHOXO15266 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.64■□□□□ 0.57
SHOXO15266 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.64■□□□□ 0.57
SHOXO15266 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SHOXO15266 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHOXO15266 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHOXO15266 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.64■□□□□ 0.57
SHOXO15266 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHOXO15266 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHOXO15266 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHOXO15266 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 AC242852.2-201ENST00000615738 1807 ntBASIC18.63■□□□□ 0.57
SHOXO15266 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.63■□□□□ 0.57
SHOXO15266 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHOXO15266 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SHOXO15266 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHOXO15266 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SHOXO15266 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHOXO15266 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SHOXO15266 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.62■□□□□ 0.57
SHOXO15266 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHOXO15266 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.62■□□□□ 0.57
SHOXO15266 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHOXO15266 AC026310.3-201ENST00000625186 2373 ntBASIC18.62■□□□□ 0.57
SHOXO15266 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 FBXW4P1-201ENST00000426721 2239 ntBASIC18.61■□□□□ 0.57
SHOXO15266 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.61■□□□□ 0.57
SHOXO15266 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SHOXO15266 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 AC022616.5-201ENST00000518796 181 ntBASIC18.61■□□□□ 0.57
SHOXO15266 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SHOXO15266 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SHOXO15266 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHOXO15266 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.61■□□□□ 0.57
SHOXO15266 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHOXO15266 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SHOXO15266 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 ATP5G2P3-201ENST00000429083 425 ntBASIC18.6■□□□□ 0.57
SHOXO15266 AC019171.1-201ENST00000601251 1056 ntBASIC18.6■□□□□ 0.57
SHOXO15266 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 AC011551.1-201ENST00000614101 683 ntBASIC18.6■□□□□ 0.57
SHOXO15266 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
SHOXO15266 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHOXO15266 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
SHOXO15266 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.59■□□□□ 0.57
SHOXO15266 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.59■□□□□ 0.57
SHOXO15266 AC004987.1-201ENST00000428627 508 ntBASIC18.59■□□□□ 0.57
SHOXO15266 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.59■□□□□ 0.57
SHOXO15266 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.59■□□□□ 0.57
SHOXO15266 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOXO15266 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHOXO15266 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOXO15266 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms