Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
HFM1A2PYH4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
HFM1A2PYH4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
HFM1A2PYH4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
HFM1A2PYH4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC32.83■■■□□ 2.85
HFM1A2PYH4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC32.83■■■□□ 2.85
HFM1A2PYH4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
HFM1A2PYH4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC32.82■■■□□ 2.84
HFM1A2PYH4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
HFM1A2PYH4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
HFM1A2PYH4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC32.82■■■□□ 2.84
HFM1A2PYH4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.82■■■□□ 2.84
HFM1A2PYH4 MIR5787-201ENST00000611784 55 ntBASIC32.82■■■□□ 2.84
HFM1A2PYH4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HFM1A2PYH4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC32.81■■■□□ 2.84
HFM1A2PYH4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
HFM1A2PYH4 AK1-201ENST00000223836 736 ntTSL 3 BASIC32.81■■■□□ 2.84
HFM1A2PYH4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
HFM1A2PYH4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
HFM1A2PYH4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC32.81■■■□□ 2.84
HFM1A2PYH4 AC104564.3-201ENST00000582367 638 ntBASIC32.81■■■□□ 2.84
HFM1A2PYH4 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.81■■■□□ 2.84
HFM1A2PYH4 AL358852.1-201ENST00000623174 1268 ntBASIC32.81■■■□□ 2.84
HFM1A2PYH4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
HFM1A2PYH4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC32.8■■■□□ 2.84
HFM1A2PYH4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
HFM1A2PYH4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC32.8■■■□□ 2.84
HFM1A2PYH4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
HFM1A2PYH4 AL354811.1-201ENST00000610286 706 ntBASIC32.8■■■□□ 2.84
HFM1A2PYH4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
HFM1A2PYH4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HFM1A2PYH4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
HFM1A2PYH4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.79■■■□□ 2.84
HFM1A2PYH4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.79■■■□□ 2.84
HFM1A2PYH4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
HFM1A2PYH4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
HFM1A2PYH4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC32.79■■■□□ 2.84
HFM1A2PYH4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.79■■■□□ 2.84
HFM1A2PYH4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.79■■■□□ 2.84
HFM1A2PYH4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
HFM1A2PYH4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC32.78■■■□□ 2.84
HFM1A2PYH4 YBX1P1-201ENST00000445822 960 ntBASIC32.78■■■□□ 2.84
HFM1A2PYH4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC32.78■■■□□ 2.84
HFM1A2PYH4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC32.78■■■□□ 2.84
HFM1A2PYH4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC32.78■■■□□ 2.84
HFM1A2PYH4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC32.78■■■□□ 2.84
HFM1A2PYH4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
HFM1A2PYH4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HFM1A2PYH4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC32.77■■■□□ 2.84
HFM1A2PYH4 LINC01960-201ENST00000563759 1884 ntBASIC32.77■■■□□ 2.84
HFM1A2PYH4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
HFM1A2PYH4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
HFM1A2PYH4 AC010141.3-201ENST00000456659 717 ntBASIC32.77■■■□□ 2.84
HFM1A2PYH4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC32.77■■■□□ 2.84
HFM1A2PYH4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC32.77■■■□□ 2.84
HFM1A2PYH4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC32.77■■■□□ 2.84
HFM1A2PYH4 MIR6084-201ENST00000622012 110 ntBASIC32.77■■■□□ 2.84
HFM1A2PYH4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
HFM1A2PYH4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC32.76■■■□□ 2.84
HFM1A2PYH4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC32.76■■■□□ 2.84
HFM1A2PYH4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC32.76■■■□□ 2.84
HFM1A2PYH4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
HFM1A2PYH4 AC087623.3-201ENST00000607047 1098 ntBASIC32.76■■■□□ 2.83
HFM1A2PYH4 DUSP8P5-201ENST00000422884 1815 ntBASIC32.75■■■□□ 2.83
HFM1A2PYH4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
HFM1A2PYH4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC32.75■■■□□ 2.83
HFM1A2PYH4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
HFM1A2PYH4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC32.75■■■□□ 2.83
HFM1A2PYH4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
HFM1A2PYH4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
HFM1A2PYH4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
HFM1A2PYH4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
HFM1A2PYH4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
HFM1A2PYH4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC32.74■■■□□ 2.83
HFM1A2PYH4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
HFM1A2PYH4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC32.74■■■□□ 2.83
HFM1A2PYH4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
HFM1A2PYH4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
HFM1A2PYH4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
HFM1A2PYH4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC32.73■■■□□ 2.83
HFM1A2PYH4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
HFM1A2PYH4 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.73■■■□□ 2.83
HFM1A2PYH4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.73■■■□□ 2.83
HFM1A2PYH4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC32.73■■■□□ 2.83
HFM1A2PYH4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
HFM1A2PYH4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC32.72■■■□□ 2.83
HFM1A2PYH4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
HFM1A2PYH4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms