Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC163A0A0D9SF12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 AL121832.2-201ENST00000610979 668 ntBASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC163A0A0D9SF12 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 AC231657.2-201ENST00000624556 255 ntBASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC163A0A0D9SF12 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC163A0A0D9SF12 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CCDC163A0A0D9SF12 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 MFSD11-216ENST00000590393 1141 ntBASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC163A0A0D9SF12 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 AC022211.4-201ENST00000625094 2161 ntBASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 OXCT2P1-201ENST00000447263 1535 ntBASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 AC135731.1-201ENST00000569415 2548 ntBASIC21.94■■□□□ 1.1
CCDC163A0A0D9SF12 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 TSPY6P-201ENST00000448518 926 ntBASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC163A0A0D9SF12 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 AC083906.2-201ENST00000511578 360 ntBASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC163A0A0D9SF12 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC163A0A0D9SF12 KRT18P6-201ENST00000555540 1265 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms