Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YIG1	YPL201C	1386 nt		5.75	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	NOP8	YOL144W	1455 nt		5.75	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	GUA1	YMR217W	1578 nt		5.75	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SDA1	YGR245C	2304 nt		5.75	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	CBP1	YJL209W	1965 nt		5.75	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	DUN1	YDL101C	1542 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	CLB3	YDL155W	1284 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YDR445C	YDR445C	408 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YER084W	YER084W	387 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YER133W-A	YER133W-A	342 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SNO3	YFL060C	669 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	PUS6	YGR169C	1215 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RPE1	YJL121C	717 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SFT1	YKL006C-A	294 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YJU3	YKL094W	942 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YAR053W	YAR053W	297 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	PRM6	YML047C	1059 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RIM11	YMR139W	1113 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SSO2	YMR183C	888 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YMR295C	YMR295C	594 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SNO2	YNL334C	669 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RPC34	YNR003C	954 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	VPS21	YOR089C	633 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YBR103C-A	YBR103C-A	144 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	IBA57	YJR122W	1494 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YHR182W	YHR182W	2358 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RFT1	YBL020W	1725 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	CDC19	YAL038W	1503 nt		5.74	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	TMA64	YDR117C	1698 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	ASF2	YDL197C	1578 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	ERP3	YDL018C	678 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	UGX2	YDL169C	672 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YDR015C	YDR015C	240 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RPN11	YFR004W	921 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YGL242C	YGL242C	546 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	BRR6	YGL247W	594 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SVP26	YHR181W	687 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	IKI1	YHR187W	930 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YIL028W	YIL028W	399 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	VMA5	YKL080W	1179 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	COQ9	YLR201C	783 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YLR444C	YLR444C	303 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YOR199W	YOR199W	330 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YPR016W-A	YPR016W-A	261 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	POP7	YBR167C	423 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	BUD8	YLR353W	1812 nt		5.73	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	ICL1	YER065C	1674 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	TOS3	YGL179C	1683 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	IME4	YGL192W	1803 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RPL13A	YDL082W	600 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	DTD1	YDL219W	453 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YFR035C	YFR035C	345 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	PEP8	YJL053W	1140 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YPT52	YKR014C	705 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	ECI1	YLR284C	843 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	YML018C	YML018C	1182 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	HAP3	YBL021C	435 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	AIM39	YOL053W	1188 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	VMA4	YOR332W	702 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	RPN7	YPR108W	1290 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	CST9	YLR394W	1449 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	TDA6	YPR157W	1404 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	EAR1	YMR171C	1653 nt		5.72	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	SSK22	YCR073C	3996 nt		5.71	□□□□□ -1.49
TY4B-P	A0A0B7P3V8	ENT1	YDL161W	1365 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	UTP18	YJL069C	1785 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YGL041W-A	YGL041W-A	465 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YGL109W	YGL109W	324 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YHR213W-A	YHR213W-A	234 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	PCL7	YIL050W	858 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	MTW1	YAL034W-A	870 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YLR217W	YLR217W	324 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YOR263C	YOR263C	408 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RMI1	YPL024W	726 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	GRE1	YPL223C	507 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RKM2	YDR198C	1440 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	IDS2	YJL146W	1410 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	ASK10	YGR097W	3441 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	TCM62	YBR044C	1719 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	MCM3	YEL032W	2916 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	ATG4	YNL223W	1485 nt		5.71	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	NOP58	YOR310C	1536 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YDL218W	YDL218W	954 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	CAD1	YDR423C	1230 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	NOP16	YER002W	696 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	BUD25	YER014C-A	462 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YHR127W	YHR127W	732 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SAM37	YMR060C	984 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YNL285W	YNL285W	372 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	CYC2	YOR037W	1101 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	TOA1	YOR194C	861 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RCN2	YOR220W	798 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RIB5	YBR256C	717 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SLT2	YHR030C	1455 nt		5.7	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YGL176C	YGL176C	1665 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RUB1	YDR139C	234 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YDR248C	YDR248C	582 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	CNL1	YDR357C	369 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SYN8	YAL014C	768 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YLR347W-A	YLR347W-A	141 nt		5.69	□□□□□ -1.5

Retrieved 100 of 7,029 protein–RNA pairs in 33.1 ms