Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 AL359258.2-201ENST00000564063 1566 ntBASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 AC026471.1-201ENST00000564629 3026 ntBASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 AC139530.1-201ENST00000575312 1977 ntBASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV22A0A0B4J277 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV22A0A0B4J277 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC12.46□□□□□ -0.42
TRAV22A0A0B4J277 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 AC005229.4-201ENST00000610085 2198 ntBASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV22A0A0B4J277 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 AL020996.1-203ENST00000536896 2307 ntBASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV22A0A0B4J277 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms