Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KRT42P-203ENST00000458343 671 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RN7SL513P-201ENST00000465715 298 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RN7SL709P-201ENST00000478855 300 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MOG-233ENST00000494692 958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 DNAJB14-212ENST00000610281 339 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 FAM81A-201ENST00000288228 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 FCGR1A-201ENST00000369168 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 FKBP4P7-201ENST00000433874 1363 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AL354707.2-201ENST00000412339 422 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 Z83851.1-201ENST00000420096 545 ntTSL 4 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 NME6-211ENST00000447314 621 ntTSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC106774.3-201ENST00000505444 169 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC018371.2-201ENST00000583051 913 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC121247.1-201ENST00000622888 1232 ntBASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AL121900.1-201ENST00000428285 1695 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS13DQ5THJ4 SP3P-201ENST00000414049 2065 ntBASIC8.34□□□□□ -1.08
VPS13DQ5THJ4 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
VPS13DQ5THJ4 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
VPS13DQ5THJ4 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC8.34□□□□□ -1.08
VPS13DQ5THJ4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
VPS13DQ5THJ4 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TAAR6-201ENST00000275198 1038 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 PDHX-202ENST00000430469 952 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 BRD9P2-201ENST00000506203 239 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 KRTAP4-7-202ENST00000621138 423 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 PLIN5-206ENST00000592610 1903 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CTF2P-201ENST00000412003 604 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC008588.1-201ENST00000514867 462 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 MIR4418-201ENST00000581169 62 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 LYSMD3-204ENST00000509384 1538 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AL512378.1-201ENST00000394808 2100 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms