Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CSNK1DP48730 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.14□□□□□ -0.31
CSNK1DP48730 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 OR10N1P-203ENST00000641736 1305 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 USP14-208ENST00000582707 1803 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CSNK1DP48730 CACYBPP3-201ENST00000406011 625 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 KRT18P39-201ENST00000415349 1299 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 KRT18P44-201ENST00000416086 1285 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AC006328.1-201ENST00000437571 379 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 DDX11L8-201ENST00000535849 366 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AL118516.1-201ENST00000564152 670 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 RN7SL678P-201ENST00000579533 299 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 RN7SL596P-201ENST00000582123 288 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 AC007450.4-201ENST00000614709 524 ntBASIC13.13□□□□□ -0.31
CSNK1DP48730 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1DP48730 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1DP48730 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1DP48730 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSNK1DP48730 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms