Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MTHFRP42898 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MTHFRP42898 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 AC083964.2-201ENST00000623988 2396 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.8□□□□□ -0.2
MTHFRP42898 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC13.8□□□□□ -0.2
MTHFRP42898 AC004910.1-201ENST00000433493 787 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 Z84721.1-201ENST00000438841 372 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC13.8□□□□□ -0.2
MTHFRP42898 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC13.8□□□□□ -0.2
MTHFRP42898 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 AC104759.1-201ENST00000559109 939 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC13.8□□□□□ -0.2
MTHFRP42898 AP006248.1-201ENST00000610471 67 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 AL137028.2-201ENST00000614601 256 ntBASIC13.8□□□□□ -0.2
MTHFRP42898 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
MTHFRP42898 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MTHFRP42898 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
MTHFRP42898 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MTHFRP42898 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
MTHFRP42898 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
MTHFRP42898 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC13.79□□□□□ -0.2
MTHFRP42898 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC13.79□□□□□ -0.2
MTHFRP42898 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC13.79□□□□□ -0.2
MTHFRP42898 AC067942.1-202ENST00000471756 1057 ntBASIC13.79□□□□□ -0.2
MTHFRP42898 AC098591.1-202ENST00000507914 937 ntBASIC13.79□□□□□ -0.2
MTHFRP42898 AC104117.4-201ENST00000521486 847 ntBASIC13.79□□□□□ -0.2
MTHFRP42898 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC13.79□□□□□ -0.2
MTHFRP42898 TLE2-205ENST00000586422 389 ntTSL 5 BASIC13.79□□□□□ -0.2
MTHFRP42898 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.79□□□□□ -0.2
MTHFRP42898 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.79□□□□□ -0.2
MTHFRP42898 MIR6165-201ENST00000614803 84 ntBASIC13.79□□□□□ -0.2
MTHFRP42898 BX510359.7-201ENST00000619819 630 ntBASIC13.79□□□□□ -0.2
MTHFRP42898 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
MTHFRP42898 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms