Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ULK4-202ENST00000414606 647 ntTSL 4 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 RNASEH2B-AS1-201ENST00000454605 1007 ntTSL 3 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 CGGBP1-203ENST00000462901 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 RN7SL116P-201ENST00000470786 305 ntBASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 GNGT2-202ENST00000503070 522 ntTSL 3 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 MTHFD2P6-201ENST00000506170 1022 ntBASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 AC106872.8-201ENST00000507651 684 ntBASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 AC005702.1-201ENST00000593015 692 ntTSL 2 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 AC010326.4-202ENST00000603829 541 ntBASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 AC125257.2-201ENST00000619176 156 ntBASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 DDC-206ENST00000431062 1620 ntTSL 5 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 LILRB4-202ENST00000391733 1742 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 AC073316.1-205ENST00000404626 557 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 AC010636.1-201ENST00000598116 628 ntTSL 3 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 AC010328.3-201ENST00000600068 553 ntTSL 4 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RIMBP3Q9UFD9 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 LINC01686-201ENST00000566297 1376 ntBASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 EEF1GP5-201ENST00000434365 1310 ntBASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 HIST1H2BPS1-201ENST00000369177 310 ntBASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 CSNK2B-204ENST00000375885 1061 ntTSL 5 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 LINC00403-201ENST00000421423 545 ntTSL 2 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 SLC25A38P1-201ENST00000458247 943 ntBASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 AC009107.2-201ENST00000569580 577 ntTSL 4 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 GABARAP-206ENST00000577035 762 ntTSL 2 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 Metazoa_SRP.56-201ENST00000612077 279 ntBASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 AC241644.3-202ENST00000622634 535 ntTSL 5 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 GDA-203ENST00000376986 1771 ntTSL 2 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 AC108024.1-201ENST00000626286 1721 ntBASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.57■□□□□ 0.72
RIMBP3Q9UFD9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 TBC1D3P4-201ENST00000338790 1075 ntBASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 FAHD2CP-201ENST00000427863 900 ntBASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 AL358176.5-201ENST00000442611 385 ntBASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 CEACAMP2-201ENST00000457904 440 ntBASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 RN7SL648P-201ENST00000478418 301 ntBASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 AC122719.2-201ENST00000511936 420 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 AP002512.2-201ENST00000532561 623 ntBASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 AC005154.5-201ENST00000583191 368 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 CD300LF-210ENST00000583937 1275 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 TRIM40-205ENST00000307859 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 PKD2-205ENST00000508588 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIMBP3Q9UFD9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 LINC02372-201ENST00000507482 1486 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 CD3D-201ENST00000300692 861 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms