Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 AC069152.1-201ENST00000438030 544 ntBASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.22■■□□□ 1.63
PTCH2Q9Y6C5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 HLA-L-211ENST00000482052 1765 ntBASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 FP325331.1-202ENST00000623531 1380 ntBASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.21■■□□□ 1.63
PTCH2Q9Y6C5 AC145676.1-201ENST00000514988 2004 ntBASIC25.2■■□□□ 1.63
PTCH2Q9Y6C5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.2■■□□□ 1.62
PTCH2Q9Y6C5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PTCH2Q9Y6C5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PTCH2Q9Y6C5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.2■■□□□ 1.62
PTCH2Q9Y6C5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PTCH2Q9Y6C5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PTCH2Q9Y6C5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PTCH2Q9Y6C5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PTCH2Q9Y6C5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 AC087239.1-201ENST00000622671 572 ntBASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.17■■□□□ 1.62
PTCH2Q9Y6C5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 SLC29A4P1-201ENST00000398760 971 ntBASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 AC005181.1-201ENST00000604782 1256 ntBASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.16■■□□□ 1.62
PTCH2Q9Y6C5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 AC231657.2-201ENST00000624556 255 ntBASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.15■■□□□ 1.62
PTCH2Q9Y6C5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms