Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 MIR3181-201ENST00000578512 73 ntBASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 AL499627.2-201ENST00000606283 725 ntBASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
KDM3AQ9Y4C1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.87■■□□□ 1.57
KDM3AQ9Y4C1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 AC068473.5-201ENST00000616428 2072 ntBASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KDM3AQ9Y4C1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 C9orf163-202ENST00000624034 2573 ntBASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 AC099791.1-201ENST00000416440 715 ntBASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 AC008764.7-201ENST00000593779 1081 ntBASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
KDM3AQ9Y4C1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 BX842568.3-201ENST00000418104 571 ntBASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 pRNA.6-201ENST00000610482 90 ntBASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 pRNA.5-201ENST00000612139 90 ntBASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 pRNA.11-201ENST00000618423 90 ntBASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 pRNA.13-201ENST00000619112 90 ntBASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KDM3AQ9Y4C1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
KDM3AQ9Y4C1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
KDM3AQ9Y4C1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.83■■□□□ 1.57
KDM3AQ9Y4C1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.83■■□□□ 1.57
KDM3AQ9Y4C1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.83■■□□□ 1.56
KDM3AQ9Y4C1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.83■■□□□ 1.56
KDM3AQ9Y4C1 AC233992.3-201ENST00000607491 485 ntBASIC24.83■■□□□ 1.56
KDM3AQ9Y4C1 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.83■■□□□ 1.56
KDM3AQ9Y4C1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 MIR5787-201ENST00000611784 55 ntBASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
KDM3AQ9Y4C1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 MIR6821-201ENST00000617625 74 ntBASIC24.81■■□□□ 1.56
KDM3AQ9Y4C1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms