Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L2-201ENST00000561772 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L6-201ENST00000626483 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L1-201ENST00000627662 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L8-201ENST00000629013 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L3-201ENST00000630187 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L7-201ENST00000630678 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 DUX4L5-201ENST00000630834 1275 ntBASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCKAP1Q9Y2A7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NCKAP1Q9Y2A7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NCKAP1Q9Y2A7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NCKAP1Q9Y2A7 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.14■■□□□ 1.13
NCKAP1Q9Y2A7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 AC004687.1-201ENST00000579003 1625 ntBASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 CCDC92B-201ENST00000575506 885 ntBASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NCKAP1Q9Y2A7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 AC022517.1-201ENST00000592429 346 ntBASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 AC087239.1-201ENST00000622671 572 ntBASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 AL353803.4-201ENST00000565882 1934 ntBASIC22.12■■□□□ 1.13
NCKAP1Q9Y2A7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 KRT18P14-201ENST00000534205 1250 ntBASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
NCKAP1Q9Y2A7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 AL137784.2-201ENST00000607332 1000 ntBASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NCKAP1Q9Y2A7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCKAP1Q9Y2A7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCKAP1Q9Y2A7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.09■■□□□ 1.13
NCKAP1Q9Y2A7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
NCKAP1Q9Y2A7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NCKAP1Q9Y2A7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms